KEGG   Malus sylvestris (European crab apple): 126601140
Entry
126601140         CDS       T09027                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    126601140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126601140
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     126601140
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     126601140
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 126601140
NCBI-ProteinID: XP_050123757
LinkDB
Position
15:complement(17700106..17702600)
AA seq 128 aa
MSWAGAEDTFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELELDKEELPPHMTLVPEAEIKRAQKAERDATDLKGSMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcgtgggctggagcagaagatactttcctttccacttctcttgcaacctatctcgac
aaaaagcttcttgtattattgcgagatggacgaaagttgttgggattgctacggtctttt
gatcagtttgctaatgttgttcttgaaggcgcatgtgaacgagtaattgtgggtgacctt
tattgtgacatcccattaggtctgtatgttatccgtggggagaatgtcgtcttaattggg
gagctggaattggataaggaagagcttcccccgcatatgactttggtaccagaagctgag
ataaaaagggctcagaaagcagagagggatgcaacagatttaaaaggctccatgagaaaa
agaatggagtttctcgattttgattaa

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