Malus sylvestris (European crab apple): 126601157
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Entry
126601157 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126601157
KO
K10756
replication factor C subunit 3/5
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03030
DNA replication
msyl03410
Base excision repair
msyl03420
Nucleotide excision repair
msyl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126601157
03410 Base excision repair
126601157
03420 Nucleotide excision repair
126601157
03430 Mismatch repair
126601157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msyl03032
]
126601157
03036 Chromosome and associated proteins [BR:
msyl03036
]
126601157
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126601157
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
126601157
DNA Replication Termination Factors
ELG1-RFC complex
126601157
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
126601157
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
126601157
Check point factors
HRAD17(Rad24)-RFC complex
126601157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_16
T2SSE
RNA12
AAA_29
Motif
Other DBs
NCBI-GeneID:
126601157
NCBI-ProteinID:
XP_050123787
LinkDB
All DBs
Position
2:complement(10929612..10933174)
Genome browser
AA seq
751 aa
AA seq
DB search
MENNGSRHRRNSLTPVKQRRSGYEPSDAETDILDSPWHGGNKWPNGGYESGGAKPELDLG
RKISPLRQSRRHSSRIEYDGPTPRTTSVVSPVRRRTNSKSPYKPGRGDSNARTLPMAGSD
IRRNISPLGKSERSRHVSPFQADQEERDLNNDGDEIVDSNRNQHHKRTNSRRSAAALRHR
SLRETDQQSNRSITPTKGERTPSPLSKSMAHQKQGQVSTPSVSEINELLAHAKLARTSPD
PILNNKAAPIYETSVSIAPGDIFFSGECNVVALPQNHLQKPKMVSSAASQQRSTTRSNGN
FGHDVNVRGLSSSYGLSQTTTTTSSSAVSRQSSGRLSMASSMRSDASRTTTASMRKFTDN
RRKSESQAWFSCMRKSSCKNKKLSPERSTFNEAAFIEKAFVEESLRQLWADKHRPTSLNG
FTCHKQEAQVLKQLVIDNVSPHILLTGPTGSGKKALTMAYLREVYGDASWEEQRTMQLVV
PLTSSPHHVELNVQLEPNARYALMGLVREINNDNELAPEVSSINFKANHKVMVLYGVDKA
EHIQHLIKWIMDCYSDACKLILCCENDSGVIESVKNRCKVIKVDAPVTHEIMEVLIQIAR
KEEFDLPMSLANKIANKSKQNLRKAIMGLEACKAHNYPFGEEQPIPLGWEEVVQELASEI
LADPSPKRLFFIRGKFQKLLIDFVHPKLILLKLVEQFLKGVDASSKRELYYWHAYYEKRL
PAGASALLKLEEFVAKFMSICRKSSNNRQHV
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggagaataatgggtcaagacacaggaggaattctctgacgccggtgaagcaaaggagg
agtggatatgagccatctgatgccgagacagacatccttgatagcccgtggcacggcgga
aacaaatggcctaatggaggatatgaatctggaggggcaaaaccagagttggatttggga
agaaagatcagccctttgaggcagagcaggagacattcttccaggattgaatacgacggc
cctactccaagaactacctcagtggtaagcccagttcgaagaagaaccaacagcaagtcg
ccctacaagcctggaagaggtgacagcaatgctcgaactttgccaatggcgggttctgat
attcgtaggaacatcagccccttgggaaaatccgagcgcagcagacatgtttcacctttt
caagcagaccaagaagagcgcgatttgaataacgatggtgatgagattgtagactcaaac
agaaaccaacatcataaaagaacgaacagcagaagatcagcagctgctctgcggcataga
tcactgagagaaactgaccagcaaagcaatcgttcaatcacgcctacaaaaggggagaga
acaccctcaccattgtccaaaagcatggctcatcagaagcaagggcaagtgagcacacca
tccgtcagcgaaatcaatgaactgcttgctcatgcaaagcttgctagaacttctccagat
cccattttgaataacaaagctgctccgatttacgaaacctcagtttctattgcaccaggt
gacatctttttctctggagaatgcaatgtcgtggcattgcctcaaaatcacttacaaaaa
ccgaaaatggtctcctctgccgcctcacaacagagaagtactactcgatcaaatggtaac
tttggtcacgatgtcaatgtccgcggactttcatcttcgtatggtttgtcacagacaacc
acaaccacttccagctctgcggtgagcaggcagagcagcgggaggctgagcatggctagc
agcatgaggagtgatgcaagcaggacaacaaccgccagcatgaggaagttcacggataat
aggaggaagagcgaaagtcaggcatggttttcgtgtatgagaaagagttcttgcaagaac
aaaaaattatcacctgagcgtagcacgttcaatgaggctgcattcatcgagaaggcgttc
gtggaagagagtctcaggcagttgtgggctgataagcatagacctacttcgttgaatgga
ttcacttgccacaagcaagaagctcaagttctcaagcaacttgtgattgataacgtcagt
ccacatattttgcttaccggaccaactggttctgggaagaaagctctaacaatggcgtat
ctacgagaagtttacggtgatgcgagttgggaagaacaaaggacaatgcaactggtggtt
ccattgacatccagccctcaccatgtggagctcaatgtacagttggaaccaaatgccaga
tatgccctaatgggtttggtcagagaaataaacaatgacaatgaacttgctcctgaagtc
agctctataaatttcaaggcaaatcataaagtgatggttctttatggtgtcgacaaagca
gagcacattcagcacttgatcaaatggatcatggactgttactcggatgcgtgtaagctc
atactttgctgcgaaaatgactccggtgtcattgaatcggtgaaaaaccggtgcaaagtc
atcaaggttgatgctcctgtgactcatgaaatcatggaagttcttattcagatagccagg
aaggaggaatttgacctacctatgagccttgccaataagattgcaaataaatcaaagcag
aatctgagaaaagcgatcatgggtcttgaagcatgcaaagcacataactatccttttgga
gaagaacaaccaattccacttggatgggaagaggtggtgcaagaacttgcttccgaaatc
ctagctgatccgtcacctaagagactatttttcatccggggaaagtttcaaaagcttctt
attgattttgtacatccgaaactgattctactgaagcttgtggaacagttcctaaaggga
gtggatgctagttctaagagggaactctattactggcatgcttattatgagaaaagactc
ccagcaggagcgagtgcgttactgaaactagaagaatttgtggccaagttcatgagcata
tgccggaagagttccaacaaccggcagcacgtgtag
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integrated database retrieval system
