Malus sylvestris (European crab apple): 126601237
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Entry
126601237 CDS
T09027
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Module
msyl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126601237
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
126601237
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
126601237
NCBI-ProteinID:
XP_050123875
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Position
15:complement(4550276..4552143)
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AA seq
586 aa
AA seq
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MSITNTLVCILVFFLASSLFIGIGQGHKILDVTKYGAMGDGRADDSQAFFKAWKDLCEGN
NDATDDIPILIVPEGKTYLLQRIKFEGPCNSKSVHVQILGNLLAPVRGAWKECDSGDWLS
FSNIENLMLDGSGKIDGQGAAWWSTSQYNARSRKLLANNDCKPNKALQFHNCQNLKLSGL
TFLNSPQAHIGINSCDNADVSDLNIHAPEDSPNTDGIDISSSTHVTIRNSFIGTGDDCIA
IGDGCSFLYITNIACGPGHGISVGSLGEDGASNKVDNIYVKDCSFTGTTNGARIKTWQGG
SGYARNITFERIKLDRAKYPIIIDQYYCNGEHNCKSQSSAVVVADVTYNDFEGTSATDEA
IKLNCDKVSGGCHNILMDKINIVPAVGDMKIFASCNNADGTHVGTTVPDVACLKSSTTEP
TTPTTPSSPKTSAPPVQILPLPSPPPIPVMPLPSPSPVPVMPLPSPSPVPVMPLPSPSPV
PIIPPPARPPVSVIPTPSLPSITPPPEDIKPPPVPITPPPQPITPPQSTAPPVPRGLDIT
GGAGEAGELDPSYFPSGAPGSANLPISYYLFCPLMVVLTATTIIFN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaccaacacactcgtttgcattttagttttctttctcgcttcatcgttgttt
attggcatcggacaaggccacaaaatattagacgtaaccaaatacggtgctatgggagat
ggacgggcagacgactcccaagctttttttaaagcgtggaaagatttatgtgaaggaaat
aatgacgctacggatgacataccgatacttattgtgccggaggggaaaacgtacttattg
caacgtataaagtttgaaggtccatgcaactcgaagagcgttcacgttcagattctaggg
aatttattggctcctgtgcgtggtgcatggaaagaatgcgattcgggggactggctaagt
ttttcaaacattgaaaacctaatgctcgacggctcaggaaaaatcgacggccaaggggct
gcgtggtggagcaccagccagtacaatgcgagatcgcgcaaactcttggcaaataacgac
tgcaaaccaaataaggcattgcagttccacaactgtcaaaaccttaagctcagcggactg
acttttctgaacagcccgcaagcgcatattggtataaatagttgtgacaatgcagatgtc
tcagatttgaacatacatgcgccggaagacagtccaaacactgatggtattgacatctct
tcctcgacccatgtcaccattcgcaactcgtttatcggaacaggcgatgattgtatcgcc
attggcgacgggtgttcctttctctacatcaccaacattgcgtgcggaccaggccatgga
attagcgttggaagcttaggagaagatggagctagtaataaagtggacaacatatacgtg
aaagattgtagttttactggaactacaaacggagcgagaataaaaacgtggcagggcggc
tccgggtatgcgaggaacatcacgtttgagaggatcaaacttgacagagccaaataccct
atcattattgatcagtactattgcaatggggaacacaattgcaaaagtcagtcgtcggcc
gtggtggtggcggatgtgacgtacaacgattttgaaggcacttctgcgacggatgaggcg
attaaactcaactgtgataaagtttctggtggctgtcataatattttgatggataaaatt
aatatagtgccagcggtcggggatatgaagatttttgcatcttgtaacaatgccgacgga
actcatgtcggcactacggtgcccgacgtggcttgtctaaagagttcaacaacggagcct
acgaccccaacaacaccatcttcaccaaaaactagcgctccgccggtacaaatcctacca
ttgccatcgccaccacctataccggtaatgccgctgccgtcgccgtcacctgtaccggta
atgccattgccgtcgccgtcacctgtaccggtaatgccactgccatcgccgtcacctgta
ccaatcattcctccgccagcgcgaccaccggtatcagtcataccaacgccatcgctgcca
tcaatcaccccaccaccagaagatatcaagccaccgccagtgccgatcacaccaccaccg
caaccaatcacgccaccacagtcaactgcaccacctgtgccacggggactagacatcaca
gggggggcaggggaggcaggcgagctagatccttcgtacttcccaagtggagctcctggc
agtgctaatctacctataagctactacctattttgcccactgatggtggtccttactgca
acaactataatttttaattaa
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