KEGG   Malus sylvestris (European crab apple): 126601296
Entry
126601296         CDS       T09027                                 
Name
(RefSeq) DNA repair protein RAD51 homolog
  KO
K04482  DNA repair protein RAD51
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03440  Homologous recombination
msyl03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    126601296
   03460 Fanconi anemia pathway
    126601296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msyl04131]
    126601296
   04121 Ubiquitin system [BR:msyl04121]
    126601296
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126601296
Membrane trafficking [BR:msyl04131]
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    126601296
Ubiquitin system [BR:msyl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    126601296
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     126601296
    RecA family proteins
     126601296
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     126601296
SSDB
Motif
Pfam: Rad51 RecA AAA_25 HHH_5 ATPase AAA_22 DnaB_C
Other DBs
NCBI-GeneID: 126601296
NCBI-ProteinID: XP_050123942
LinkDB
Position
15:complement(18151113..18153892)
AA seq 340 aa
MEQQSNQKTAQQQDELQEMHHGPVPVDQLQASGIASIDVKKLKDAGLCTVEAVAYSPRKD
LLQIKGISDAKVDKIIEAASKLVPLGFTSAGQLHAQRLEIIQITSGSRELDKILEGGIET
GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAERFG
LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR
LAVRKGRGEERICKVISSPCLAEAEARFQISPEGVTDVKD
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggagcagcagagcaatcagaagactgcccagcaacaagacgagctccaagaaatgcac
catggccctgtccccgtcgatcaacttcaggcgtccggcatagcttccattgatgtaaag
aaacttaaagatgcgggtctttgcactgttgaagccgtcgcttactctcccaggaaggat
cttctgcaaatcaaaggaatcagcgacgctaaagttgacaagatcatcgaagcagcctcc
aaacttgtgcctttgggttttactagcgctggccagctccacgcacagagactcgaaatc
attcaaattacttctggatcaagagaacttgataagatattggagggaggaattgagaca
ggatctattaccgagatatatggcgaattccgttctggaaagacccagttgtgtcacacg
ctttgtgtaacttgccaacttcccttggatcaaggaggcggtgagggaaaagcaatgtac
attgatgctgagggtacattcaggccacaaagactcttacagattgcagagaggtttgga
ctcaatggtgctgatgtcttggagaatgtggcgtatgctagagcttataacacggatcac
caatcaaggctcttgctcgaagcagcctccatgatggtagaaacaaggtttgctctcatg
atagtagatagtgctacagccctgtacagaacagatttctcaggaagaggtgaactttca
gcccgtcaaatgcatcttgcaaagtttctccggagccttcagaagttagcagatgagttt
ggcgtagctgttgtgatcacaaatcaagtggttgcccaagttgatggttctgcaatcttt
gccggtcctcaaattaagcctattggtggtaacatcatggctcatgcttccaccacaagg
cttgctgttaggaaaggaagaggcgaagagcgcatctgtaaagtgataagttctccttgt
ttggccgaagcagaagcacggtttcagatctccccggaaggtgtcaccgacgtcaaggac
taa

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