Malus sylvestris (European crab apple): 126601296
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Entry
126601296 CDS
T09027
Name
(RefSeq) DNA repair protein RAD51 homolog
KO
K04482
DNA repair protein RAD51
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03440
Homologous recombination
msyl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126601296
03460 Fanconi anemia pathway
126601296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126601296
04121 Ubiquitin system [BR:
msyl04121
]
126601296
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126601296
Membrane trafficking [BR:
msyl04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
126601296
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
126601296
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
126601296
RecA family proteins
126601296
FA (Fanconi anemia) pathway
Other FA pathway factors
126601296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
AAA_22
DnaB_C
Motif
Other DBs
NCBI-GeneID:
126601296
NCBI-ProteinID:
XP_050123942
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All DBs
Position
15:complement(18151113..18153892)
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AA seq
340 aa
AA seq
DB search
MEQQSNQKTAQQQDELQEMHHGPVPVDQLQASGIASIDVKKLKDAGLCTVEAVAYSPRKD
LLQIKGISDAKVDKIIEAASKLVPLGFTSAGQLHAQRLEIIQITSGSRELDKILEGGIET
GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAERFG
LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR
LAVRKGRGEERICKVISSPCLAEAEARFQISPEGVTDVKD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagagcaatcagaagactgcccagcaacaagacgagctccaagaaatgcac
catggccctgtccccgtcgatcaacttcaggcgtccggcatagcttccattgatgtaaag
aaacttaaagatgcgggtctttgcactgttgaagccgtcgcttactctcccaggaaggat
cttctgcaaatcaaaggaatcagcgacgctaaagttgacaagatcatcgaagcagcctcc
aaacttgtgcctttgggttttactagcgctggccagctccacgcacagagactcgaaatc
attcaaattacttctggatcaagagaacttgataagatattggagggaggaattgagaca
ggatctattaccgagatatatggcgaattccgttctggaaagacccagttgtgtcacacg
ctttgtgtaacttgccaacttcccttggatcaaggaggcggtgagggaaaagcaatgtac
attgatgctgagggtacattcaggccacaaagactcttacagattgcagagaggtttgga
ctcaatggtgctgatgtcttggagaatgtggcgtatgctagagcttataacacggatcac
caatcaaggctcttgctcgaagcagcctccatgatggtagaaacaaggtttgctctcatg
atagtagatagtgctacagccctgtacagaacagatttctcaggaagaggtgaactttca
gcccgtcaaatgcatcttgcaaagtttctccggagccttcagaagttagcagatgagttt
ggcgtagctgttgtgatcacaaatcaagtggttgcccaagttgatggttctgcaatcttt
gccggtcctcaaattaagcctattggtggtaacatcatggctcatgcttccaccacaagg
cttgctgttaggaaaggaagaggcgaagagcgcatctgtaaagtgataagttctccttgt
ttggccgaagcagaagcacggtttcagatctccccggaaggtgtcaccgacgtcaaggac
taa
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