KEGG   Malus sylvestris (European crab apple): 126601461
Entry
126601461         CDS       T09027                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126601461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126601461
   03041 Spliceosome [BR:msyl03041]
    126601461
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     126601461
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     126601461
Spliceosome [BR:msyl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    126601461
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 126601461
NCBI-ProteinID: XP_050124126
LinkDB
Position
15:complement(35589249..35599895)
AA seq 497 aa
MAKKRKLSSTEPSEPSKKQQQVVEEPKPQIEPAQEVVEEEEEEVEEEEVEEEEPEEEKED
EGADEEEEEEEEDEEEPGAEYKETYNVTTTSISAASDQAGAGNDEDEPIQNLLEPFTKEQ
LMALLREAADNHGDVADRIRKVADEDPIHRKIFVHGLGWDTNAETLTGVFREYGEIEDCK
AVCDKVSGKSKGYGFILFKTRSGARKALQQPQKRIGNRMTACQLAAIGPGPAPNAAAGPV
VAQAVQSQPMSEYTQRKIYVSNVGADLDIQKLLMFFSRFGEVEDGPLGLDKLTGRPKGFC
LFVYKSAESAKRALEEPHKNFEGHILHCQKAIDGPKPGKSQHQHQNQHHHKSHNSKFQRN
ENPGYAGGAASGMGHLMAPASGGIGFNQGAPAAQAFNPAIGQALTALLATQGAGLGLTNL
LGTFGSAPNVNPGVPGAGHVIQGGYGNQASISPGMMGSYGNQGAMQGGYPNPQLGQGGSG
RGQHGVGQSGGAPYMGH
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggcgaaaaagagaaagctcagctccaccgagccctccgaaccctccaagaagcaacaa
caggtcgttgaggaacccaaaccccaaattgaaccagcacaggaagtagtcgaagaggaa
gaagaagaagtcgaagaagaggaggtggaggaggaagagccggaagaagagaaggaagat
gaaggagccgatgaagaggaagaggaagaagaggaggacgaagaggagccgggcgctgag
tataaggaaacctataacgtaaccacgacctccatctcagcggcttcggatcaggccggt
gccggtaacgacgaggacgagccgatccagaatcttctagaaccattcaccaaggaacag
cttatggccctgctccgcgaagctgccgataatcatggcgacgtggcggatcggatccgg
aaggttgcggatgaggacccaatccaccgcaagatcttcgtccacggtctcggatgggat
accaacgccgaaaccctaactggcgtatttagggaatacggtgagattgaggattgcaag
gctgtttgcgataaggtctctggtaagtccaagggttacggtttcattctcttcaagact
cgttctggggcccgaaaagccctacagcagccccagaagaggatcggtaatcggatgact
gcatgccagctggcggcaattggccctggcccggctcctaatgccgctgctggacctgtg
gtggcccaggcggttcagtcccagccaatgtctgagtacactcagaggaagatctatgtg
agcaatgttggggcggacttggatatccagaagctgcttatgttcttttctaggtttgga
gaagttgaggacgggccactagggctcgataagctaacggggaggcctaaggggttttgc
ttgtttgtgtacaagtcggcagagagtgcgaagagggctctggaagagccacacaagaat
tttgagggccatattttgcattgccagaaggctattgacggtccaaagccgggcaagtct
cagcaccagcaccagaaccagcaccaccacaagtcacataattccaagtttcagaggaat
gagaatccaggttatgcaggtggagctgcatcaggaatggggcatttgatggcgcctgcg
agtggagggattggatttaatcagggggctcctgcagcccaggcgtttaacccggcaatt
gggcaggcactgactgctttgcttgcaacacagggagctggcttggggttgacaaacctt
ttggggacgtttggatctgctccaaatgtgaacccaggtgttcctggtgcaggacatgtg
atacagggtggatatgggaatcaggcaagtattagtcctgggatgatgggaagctatgga
aatcaaggtgcaatgcaaggtggctaccctaacccgcagttagggcaaggtggttcagga
agagggcagcatggcgttgggcaatctggtggcgctccgtacatggggcattag

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