Malus sylvestris (European crab apple): 126601640
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Entry
126601640 CDS
T09027
Name
(RefSeq) heparanase-like protein 3 isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00531
Glycosaminoglycan degradation
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
126601640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
msyl00536
]
126601640
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
126601640
Glycosaminoglycan binding proteins [BR:
msyl00536
]
Heparan sulfate / Heparin
Enzymes
126601640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
126601640
NCBI-ProteinID:
XP_050124336
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All DBs
Position
15:complement(9257167..9261839)
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AA seq
563 aa
AA seq
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MCEGMRSLVTLSLLCYGLYWATHSHKSSISVASLSTEETLFVNKTAAIGATDDDFICATI
DWWPPQKCDYGTCSWGSASLLNLHEIATCRKRLCTKLQLSEKGYAPNCNFQKKDLDNAIF
LNAIKAFAPLKIRLGGTLQDKVTYLADGSQPPSTSFVKDGSQLFGFSQGYLPMPRWDQLN
SFFNKTGAVIIFGLNALIGRNIDSNGAATGAWNSTNAETLIRYTVDKGYTIHGWELGNEL
SGNGVGTKVSADQYAADTHTLHEILQKIYADYGSKPLVLAPGGFFDADWFTEFVHKTPLS
LKVITHHIYNLGPGSAGDLVDKILDPDVLDGISQTFSSLQNLVETSDTSAVAWVGEAGGA
YNSGHDLVTNAFVFSFWYLDQLGLAASYDTKTYCRQTLIGGNYGLLDTNTFQPNPDYYSA
LLWHRLMGNKALSTSFSGTKKIRAYAHCSKKTKGITVLLINLDGNTTVQVRVSTDSTGRP
VSSESLQSSKDSDDVREEYHLTAQDGDLQSKVMLLNGKALIVDSSGDIPPLEPITVRLSD
PTTVAPFSIVFVHIPNTTVLACA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaaggtatgcgttctctggtgactctttcattgctttgctatgggctgtactgg
gcaactcacagccacaagtcatcaatctcagtggcttcattgagcaccgaagaaaccctt
tttgtgaataaaacagctgcaattggagctacagatgatgactttatctgtgccacaatt
gattggtggcctcctcagaaatgtgattacggaacttgtagttggggctctgcttctctt
ctcaatctgcacgaaattgcaacttgcagaaaaaggttatgcacgaaattgcaactttca
gaaaaaggttatgcaccaaattgcaactttcagaaaaaggatcttgacaatgctatattt
ttaaatgctataaaagcatttgcacccttgaaaattaggttgggtggcactttacaagat
aaagtcacatacctggcagacggaagtcaaccaccttccacctcatttgtcaaagatggt
tcacaattgtttggtttctctcaaggttacttaccaatgcctagatgggaccaactaaac
agtttcttcaataaaactggggctgttattatttttggtttaaatgcactcataggtaga
aacatagactccaatggtgcagctactggtgcttggaattcaaccaatgcagaaacctta
ataagatatacagtcgacaagggatacacaattcatggttgggaacttggaaatgaactg
agtgggaatggagttggaacaaaagtttcagcagaccaatatgcagcagacacacacact
ctccatgaaatactgcagaaaatttatgcagattatggatcaaagccactagtcttagca
ccaggaggcttctttgatgccgattggttcacagaatttgttcataaaactcctctttcc
cttaaagtaatcactcaccacatatataatcttggtccaggtagtgctggagatctcgtt
gacaagatcctagatccagatgttctcgatggtatttcgcagaccttcagcagcctacaa
aaccttgttgagacatcagacacttcagcagtggcatgggttggtgaagcaggaggtgct
tacaacagtggccatgatcttgttacaaatgcttttgtgtttagtttctggtacctagac
cagcttggtttggcagcatcttatgacaccaaaacatattgcagacagacattgattggt
ggaaattatgggctccttgacaccaacacctttcaaccaaatcctgattattacagtgct
cttctttggcatcgtttaatgggaaacaaggccctctccacaagcttctctgggacgaag
aagatacgtgcctatgctcattgttcaaagaagacaaaaggaatcacggtgctcctcatc
aacctagacggtaacactacagttcaagtccgagtttcgactgatagtactggcaggcct
gtgagttccgaaagccttcagagttcgaaagatagtgatgatgtaagggaagaataccat
ctaacagctcaagatggggacttgcagagtaaagtaatgctactaaatgggaaagcactt
attgtagattcatctggggatattccacccttggaaccgataacagtcaggctatcagat
ccaactaccgtggcgccattctctattgtatttgttcacattccaaacacaaccgtgctg
gcttgtgcatag
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