Malus sylvestris (European crab apple): 126601738
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Entry
126601738 CDS
T09027
Name
(RefSeq) SNW/SKI-interacting protein-like
KO
K06063
SNW domain-containing protein 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126601738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126601738
Spliceosome [BR:
msyl03041
]
Complex B
Other components
Prp19-related factors
126601738
Complex C
126601738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
126601738
NCBI-ProteinID:
XP_050124455
LinkDB
All DBs
Position
15:15157562..15160013
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AA seq
609 aa
AA seq
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MTSLNELIPPPTATTTTYYDHSNDPWFRQRFSSSEAERSAAVVKPNPVPQYLKRQGFVPR
KVEDFGEGGAFPEIHIAQYPLGMGRDKVAKPGTKILPVSVDANGEIAYDAIVKQNENSRK
IVYSQHKDIVPKILKDAEEEMEEDEDEEEQKVIEETTAETKAALEKIVNVRLSAAQPKNV
AKQSSESQYIKYKPSQKSEAFNSGAKERIIRMMEMPVDPLEPPKFKHKRVPRASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLS
ESLYVAEQKAREAVAMRSKVQKEMLMKEKEKKEQELRALAQKARSERTGAAPPAAIPMAS
DRTAMDTDMRGDYERPTREKEADYPKETREEKEERMRREKIREERRKERERERRLEAKDV
AMGKKSKITRDRDRDISEKVALGMASAGAGKGGEVMYDQRLFNQEKGMDSGFATDDQYNV
YDKGLFTAQPTLSTLYRPKKDVDGEMYGGADEQLDKIMKTDRFKPDRGFGGAAERAGPRD
RPVEFEKDAVEEADPFGLDQFLTEVKKGGKKALDKVGTGGTMRASAGSSMRDGYEGGSSR
SRIGFERGR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctctgaacgagctgattccgccgccaacggcaaccacaacgacatattacgac
cactcgaacgatccgtggttccggcagcggttcagttcttccgaggcggaaagatctgct
gctgtcgttaaacctaatcctgtgcctcagtacttgaagcgccaaggctttgttcctagg
aaggtggaggacttcggggaaggcggcgctttcccggagattcacatagctcagtaccct
cttggcatgggccgggacaaggtggcgaaacctgggacaaaaattcttccggtttcagtt
gatgccaatggggagattgcgtatgatgccattgttaaacagaatgagaactcgagaaag
attgtgtattctcaacataaggatattgtaccaaaaattttgaaggatgcggaagaggag
atggaagaggatgaggatgaggaggagcagaaggtgattgaagaaacgactgcagaaaca
aaggctgcgcttgagaagattgtgaatgtgagattgagcgctgcacagccgaaaaatgtg
gccaagcagtcgtcagaatcgcaatatatcaagtataaaccgtctcagaaatcggaggca
tttaattctggtgccaaggagaggattatcaggatgatggagatgcctgtggatccactt
gagcctcctaagttcaagcataagcgtgttccgagggcttctggatccccacctgtgccg
gtcatgcattcccctcctcggccggtgactgtgaaagaccagcaggattggaagattcca
ccttgcatttcaaactggaagaacccgaaagggtatacaattcctttggacaaacgtctt
gcagctgacgggagaggccttcaagatgttcagatcaatgataattttgcaaagctctct
gagtctttgtatgtagcagagcagaaggctagagaggcagttgctatgagatcgaaagtt
cagaaggaaatgttgatgaaggagaaggaaaagaaagaacaggagttgagggcattagct
cagaaagctcgttctgagagaacaggtgctgcgccccctgcggccattccaatggcttct
gacagaacagccatggatactgatatgagaggggattatgagcgtccaacaagggaaaag
gaagcggattatccaaaggagacgagggaggaaaaagaagaaaggatgcggcgggagaag
attcgcgaggagcggcgcaaagagagggaaagggagagaaggttggaggccaaagatgta
gcaatggggaagaaaagtaaaattacgagagatagagatcgtgatattagtgagaaagtt
gcccttggcatggcttctgccggagcaggcaaagggggagaggttatgtatgatcagagg
ctattcaaccaggagaaaggaatggactcagggtttgccactgatgaccagtacaatgtt
tatgacaagggcttgtttactgcacagccgacactctcaactctatacaggcctaagaag
gatgttgatggtgaaatgtatggtggcgctgatgagcagttggataagattatgaagact
gatcgcttcaaacccgacagaggatttggaggagctgctgagagggcagggccaagagat
agaccggtcgagtttgagaaggatgctgttgaagaagccgatccatttggtcttgaccag
ttcttgacagaggtgaagaagggcggcaagaaagccctcgataaggttggaacaggaggg
acaatgagagcaagtgccgggtcttccatgagagatggctatgaaggcggctccagcaga
tctcgtattggattcgaaaggggtcgctaa
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