Malus sylvestris (European crab apple): 126601832
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Entry
126601832 CDS
T09027
Name
(RefSeq) nuclear pore complex protein NUP96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126601832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126601832
03036 Chromosome and associated proteins [BR:
msyl03036
]
126601832
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126601832
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126601832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
126601832
NCBI-ProteinID:
XP_050124558
LinkDB
All DBs
Position
15:49302503..49308817
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AA seq
1032 aa
AA seq
DB search
MGIDSGTPPNSHIACQHKKRRVSQDTCFSLSGTFSHLEASVPCLPTLEAADYYTQPSLKD
LAAREYADPGFCSQVLDFTVGRLGYGSVKYPGKTDIRCLELDNIVKFHRHEVIVYEDEAV
KPLVGQGLNKPAEVTLVLQTRPSNIDERQKYNIVKKLRQSAEGQGAHFISFNPESGEWKF
FVHHFSRFGLNEDDEEDIMMEDSASAQDLVEMNHGEISDGDEESQMDPTGIVLSHSLPVH
LGLDPVKMKEMRMLMFHDEEEEAEDLNHIPAHYNSSFASQRMSQRSTPPAVRKTPLALLE
YKHGSFDSNSPGAILMAQENKAMPPKTLKEGFKLDHKHETPVTRKHSRNIVDAGLFMGRS
FRVGWGPNGTLVHAGTPVGSNGSPMMLSSIINIEKVAIDSVVRDENNKVREELVDMAIDS
PLDLHKGISHQTKEIEVGSFNLRLQKLVSNRLMLPQICRSYVDIIEKQLEVPSLSSSVRL
VLTHQIMIWELIKVLFSDRENGGKLKSLGADSEEEMVQDVKEASQQADLEALPLIRRAEF
SYWLQENVSHRVQEKISSLNESSYLEYILLLLSGRQLDASVELAASRGDVRLACLLSQAG
GSIVNRTDVAQQLDRWRINGLDFNFIEKDRIRLYELLAGNIHGAFHDVNVDWKRFLGLLM
WYHLEPSTSLPTIFHTYQHLLDDGKAPYPVPVYIDEGLVEEAGNSNAAKRYDLSYYLMLL
HASEESEVGFLKPMFSAFSSTHDPLDYHMIWHQRAVLEAVGAISSKDLHVLDMGFVSQLL
CLGQCHWAIYVVLHMPQSEDFPYLHSNLIREILFQYCESWSSQESQRQAIVDLGIPNAWL
HEAMAVYFNYYGDLAKALEHFLECANWQRAHTIFVTSVAPKLFLSVEHSDIWRIATSMED
HKSEIENWDLGAGIYISFYSIRSSLQEVNDTMNQMDSLESRNSACREFLGQLNQSLAVWG
VRLPIDVRVVYSKMADEICNLLLSDIGEGPTRDVQLSCFDTVFSAPIPEDNRSSHLQEAV
SLFTCFLSEVAT
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggcattgattctggaactcctcctaattcacatattgcatgtcaacacaagaaacga
agggtttctcaggacacttgcttttctttgtctgggacttttagccatcttgaagcatct
gtaccctgtttaccaactttagaagcagctgattactatacgcagccctctttaaaggat
ttggctgctcgagaatacgcagatcctggtttttgtagccaagtgttggacttcacagtt
gggagacttggttatggctctgtcaagtatcctgggaagactgacataaggtgtttggaa
ttagataatattgtcaagttccacagacacgaggtaatcgtatatgaagatgaagctgtc
aagcctttggttggccaaggccttaacaagcctgctgaagtaactttggtcctgcaaaca
agaccgtcaaatattgacgagagacaaaaatataatattgtgaaaaagttgaggcagagt
gcggagggacaaggagctcactttatttcgtttaatccagaaagcggggaatggaaattc
tttgttcaccatttcagcagatttgggttgaatgaagatgatgaagaagacatcatgatg
gaagatagtgcttcagctcaagatcttgtggaaatgaaccatggtgagatttctgatggt
gatgaagaaagccaaatggatcccactggaattgtgctttcgcattctctacctgtacat
cttgggcttgaccccgtaaagatgaaagaaatgagaatgttgatgttccatgatgaggaa
gaggaggctgaggatttgaatcatatccctgcacattataattcatcctttgcttctcag
aggatgagtcagagatccactccaccagctgtgcgaaaaaccccactggcattgctagag
tacaagcatggtagttttgactcaaattctcctggagccattctaatggcccaagaaaat
aaggccatgccccctaagacattgaaagaaggttttaagcttgatcacaagcatgaaaca
ccagtaaccagaaaacattctcgcaacatagttgatgctggtctgtttatgggtaggtca
tttcgagtaggatggggcccaaatggaacccttgtccatgctggaacaccagtcgggagt
aacggttctccaatgatgctatcatccataatcaatatagagaaggttgctattgacagt
gttgttcgagatgaaaacaacaaagttagggaggaacttgttgacatggctattgattct
cctttagatcttcacaagggaatatctcatcagacaaaggagattgaagttggatcattc
aacctgaggcttcaaaagcttgtctccaaccgcctaatgcttccacagatttgtaggagc
tatgtagatattattgagaagcagctggaagttcccagcctatcttcctctgttcgtttg
gttttgacacaccaaataatgatttgggagttgataaaagttctcttttctgatagggaa
aatggtggaaaattgaaatctttgggtgctgatagtgaggaagaaatggttcaagatgtg
aaggaagcttctcaacaagcagatctggaagctttacctcttattcggagggcagagttt
agctattggttgcaagagaatgtttcccatcgagtacaagaaaagataagctccttgaat
gagtccagttatctagaatatatattgttacttttgagtgggcgtcagttggatgcttct
gtggaacttgctgcttctcggggagacgtgagattggcttgtttgttgagtcaggccggt
gggtccatagtcaatcgtactgatgttgcccaacaacttgatcgttggaggatcaatggg
ctcgatttcaacttcattgagaaagacaggataaggctctatgagttgcttgctggtaat
atccatggtgcgtttcatgatgttaacgttgattggaagaggtttctagggttgttgatg
tggtatcatttagaacctagcacttcactgcctacgatttttcacacctatcaacatctt
cttgatgatggtaaagctccatacccagttccagtctacattgatgaaggactggtagaa
gaggctgggaattcgaatgcggcaaaacgttatgatctatcttattatctgatgctgctt
catgccagtgaagaaagtgaagttggctttcttaagcccatgtttagtgccttctcgtca
acacacgatccactggattaccatatgatctggcatcagcgtgcagttttggaagcagtt
ggtgctatcagctctaaggatcttcatgttcttgacatgggatttgtttcccagctgttg
tgtcttgggcaatgtcattgggccatctatgtggtccttcacatgccccagtctgaagat
tttccatatctccattctaatcttattcgggaaatcttgttccaatattgtgaatcctgg
agttcacaagaatcacaacgccaagccattgtagacttgggtattcctaacgcatggctt
catgaggctatggctgtgtatttcaattactatggggatcttgcgaaggctcttgaacac
tttcttgaatgtgcaaattggcagagagcacatactatttttgtaacttctgttgctccc
aaattattcttgtctgtcgaacactcagatatatggagaattgcaacttccatggaggac
cacaaatcagaaattgaaaattgggacctcggagctgggatttatatttcattctattcg
attagaagttcattgcaggaagtgaacgataccatgaatcaaatggattcacttgaaagc
agaaattctgcttgtagagaatttcttggtcagttaaaccagtctttggctgtttggggt
gtcaggttaccaattgatgtgagggtagtatattcgaagatggcggacgagatatgcaat
ttgcttttatctgatattggcgagggaccaacacgagatgttcaattaagttgctttgac
actgtttttagtgctcccattcctgaagacaatcgctcgagccatttgcaagaggcagtg
tctctctttacatgctttctttcagaggttgctacgtag
DBGET
integrated database retrieval system
