Malus sylvestris (European crab apple): 126601951
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Entry
126601951 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126601951
KO
K14794
ribosomal RNA-processing protein 12
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126601951
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
Other 90S particles
126601951
Pre-60S particles
Other pre-60S particles
126601951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
DUF7097
DsbG_N
Hemerythrin
Motif
Other DBs
NCBI-GeneID:
126601951
NCBI-ProteinID:
XP_050124682
LinkDB
All DBs
Position
15:complement(17880881..17887955)
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AA seq
1261 aa
AA seq
DB search
MEGIEVDDVHSLPLSDDDDICASIFTRFSSSTREDHHHLCAAVGAMAQELKDKNLPSTPV
AYLGFTCSSLDGLASQPDPPGHVIDALLTILSIVFQKVSVGILVKKSEFLSELLVRVLRS
PSLTAGAAFSGLKCISHLLIVRGRVNWSDVSQLYGFLLSFVTDSRPKVRRQSHLCLRDVL
QSFQGTPLLAPASEGITNLFERFLLLAGGSKADVSEGPQGAQEVLYVLDALKECLFLMSI
KYKTDVLKYYKTLLELRQSLVTKRITDSLNILCLNPSTDVSLEVLLDLLCSLALSVSTNE
TSVDGMTFTARLLGTGMAKVYSLNRQICVVKLPLVFIALKDVLASEHEEAIHAAADTFKG
LIRACIDESLVKQGVDQIVMNAKNDARKSGPTIIEKVCATIESLLGYHYAGVWDLAFQVV
SAMFDKLGVYSSYFMRGAMKSLEEMEKLPDEDFPFRKQLHECFGSALVAMGPETFLGLLP
LNLEAEDLSQVNVWLFPILKQYTIGARLSFFTESILGMVGMIKEKSKKLESQGRIVSSRS
SDALVHALWSLLPSFCNYASDTAESFKDLEQALCSALQDEPEIRGIICLSLQILVQQNKK
IVEVNDLSDSELGSARHRAMANYTPEVTEGNMSVLKSSARKLLPVLSGVFLNTTKDDAGC
LQSTIGEFASISDKEVVSRYFRSTLVKLLKVTEEARKAESSRDSNTMRAQLFDMAVSLLP
GLDAKEVDVLFSAIKTALQDNEGLIQKKAYKVLSIILRDCDWFLSLKRKELSDIMIEVLP
SCHFSAKRHRLDCLYLLVVHVSKSDTEQMQHDIISSFLTEIILALKEANKKTRNRAYDIL
VQIGHACGDEETGGKRENLLQFFNMVAGGLAGETPHMISAAMKGLARLAYEFSDLVSSAS
NLLPSTFLLLQRKNKEIIKANLGLLKVLVAKSQAEGLQLHLKSMVEGLLKWQDATKSHFK
AKVKLLLEMLVKKCGLDAVKAVMPQEHMKLLTNIRKLKERKERKLGSKSEEARSQVSKAT
TSRLSRWNHTKIFSDFGDEENEDSDADYMDAKTESGRRGKVSTQLKSKASSLRRTNNKKL
LDQLEDEPLDLLDRQRTRSALRSSESLKRKMESDDGPEIDPDGRLIIRDEAESYKEKPSE
PDYDARSEADSHLSANSKKTQKRRKTSESGWAATGKEYASKKAGGDLKRKDKLEPYAYWP
LDRKMMSRRPEHRAAARKGISSVVKMTKKLEGQSASAILSAKGSKFKGRVQKKGGGKKKT
R
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcatcgaagtggacgacgtccactccctccctctaagcgacgatgacgacatc
tgcgcctcaatcttcacgcgcttcagcagctccacgcgcgaagaccaccaccacctctgt
gccgccgtcggcgccatggcccaggagctcaaagacaagaacctcccttcgactcccgtc
gcatacctcggcttcacgtgctcgtccctcgacggcctcgcctcccagccagacccaccc
ggtcacgtgatcgacgccctcctcacgattctctccattgtctttcagaaagtatcggtg
gggattctcgtgaagaagagcgagttcttatcggagctcttggtccgtgttcttcggtcg
ccgtcgttgacggcgggtgccgccttctcgggattgaaatgtatatcgcatttgctcatt
gtcagaggccgcgtcaactggtctgatgtctctcaattgtatggattcctattgagtttc
gttacggattctcgcccgaaggtgagaagacaatcacatttgtgccttcgcgatgtgctg
caaagttttcaaggaacaccgctccttgcccccgcaagtgaagggataactaacttattt
gaaagatttcttctgcttgccggtgggtcaaaggcagatgtgagtgaaggaccccaggga
gcccaagaggtcttgtatgttttggatgctctgaaagagtgtctgtttcttatgtcaatc
aagtacaaaaccgatgtcctcaagtactacaaaactcttctggaactgcgccaatcactt
gttacaaagcgtataacagacagtttgaatatactttgtctcaatccatcgacagatgtt
tctcttgaagtattgctcgatctattatgctcattagctctttctgtctctacgaatgag
acatctgtggatggcatgacatttacagctcgcttgcttggtactggaatggcgaaagtt
tattcccttaacaggcaaatatgtgtagttaaactccctcttgtattcattgcactcaaa
gatgtgttggcatctgagcatgaagaggctatacatgcagcagcggacacatttaagggt
ctcattcgtgcttgcattgatgaaagcttggtcaaacagggagttgaccagattgtaatg
aatgcaaaaaatgatgcaaggaagtctgggccaactataattgaaaaagtgtgtgctact
attgaaagcttacttggttatcactacgcaggtgtctgggaccttgcatttcaagttgtc
tcagcaatgtttgataaacttggggtatactcttcttatttcatgaggggtgcaatgaag
agcttggaggaaatggagaagttacctgatgaagatttccctttcaggaaacagttgcat
gaatgctttggatcggctcttgttgcaatgggacctgaaacatttttaggtcttctacct
cttaatttggaggctgaagacctaagtcaggtgaatgtttggctctttccgatactgaag
cagtatacaattggtgcacgtttgagcttctttacggagtcaattttgggtatggttgga
atgataaaggagaaatctaaaaagctggagtcacaaggacgtattgtttcatcaaggagt
tcagatgcacttgtacacgctttgtggtcactgttaccttccttttgcaactatgcttct
gatactgctgaaagtttcaaggatcttgagcaagccttatgcagtgcccttcaggatgaa
cctgagattcgtgggataatatgcttgagcttgcagattcttgttcaacaaaataagaaa
attgtggaagtgaatgatctgtctgatagtgaattaggtagcgccagacatagagctatg
gccaattatacccctgaagttacagaaggtaacatgagcgtactcaagtcatctgcacgc
aagttactacctgttctatcaggtgttttcttgaataccacaaaagatgatgcaggctgt
ttgcagtccacaattggtgagtttgcttcaatatcagataaagaagttgtctcaagatat
tttagaagtacattggtgaagcttttgaaggttactgaagaggctaggaaagcagaaagc
tctagagattctaataccatgcgggcacaactatttgacatggcagtctcacttttacct
ggtttggatgctaaagaggttgatgttttatttagtgcaataaagactgcattgcaggat
aatgaaggattgatacaaaagaaggcatacaaagttctttcaatcattctcagggactgt
gattggtttctttcattgaagcgcaaggaattgtcagatattatgattgaagtacttcct
tcatgccatttttcagctaaacggcacagacttgactgcttgtacctcctagtagtccat
gtttcaaagagcgacactgagcagatgcagcatgacatcataagttctttcctgacagaa
ataattcttgcacttaaagaggctaacaagaaaacaagaaatagagcttatgacatcctt
gtccaaattggccatgcttgtggagacgaggagactggcgggaagagagaaaacctgctg
caattttttaacatggtagctggggggctagctggtgaaactcctcatatgatcagtgct
gcaatgaagggcttagctcggttggcttatgaattttctgaccttgtttcaagtgctagc
aatttgctcccatccacatttctcctccttcagagaaagaacaaagaaataattaaagct
aatttgggtttgttgaaagtattagtagccaaatcacaagctgaggggttgcagttgcac
ttgaaaagcatggtggaaggcttgctcaagtggcaagatgctactaaaagccacttcaaa
gccaaggttaagctgcttctagaaatgctcgtcaagaaatgtgggcttgatgctgttaag
gctgtgatgcctcaagagcatatgaaactacttacgaacatacggaagcttaaggaacga
aaagagagaaagctgggttctaaatctgaggaagctagatctcaagtgtccaaagcaact
acatccaggctaagcaggtggaaccatacaaaaatcttttctgattttggtgatgaagaa
aatgaggacagcgatgcagattatatggatgccaaaacagagtcgggcagacgtggcaag
gtgtccacacagctcaaatccaaagcatcttcattacgaagaacaaataataagaagttg
cttgatcagctagaggatgagccacttgatctgcttgatcggcaaagaactaggtctgca
ctcaggtcatctgagagtttaaagcgaaagatggagtcggatgatgggccagagatagac
cctgatgggcgcctaataattcgcgacgaagcagaatcgtacaaggaaaagccatctgaa
cctgattatgatgcaagaagcgaagcggatagtcacttgtctgcaaactcaaagaaaaca
caaaaacgcaggaagacatcagagtccgggtgggctgccaccggcaaagagtacgccagc
aagaaggctggtggggatttgaagaggaaggacaagcttgaaccatatgcatattggcca
cttgatcggaagatgatgagccgtagaccagagcatagggcggccgcgagaaaaggtata
tcgagtgtggtgaaaatgacgaagaagctcgaagggcagagtgcctcggccatcctctcc
gctaaaggctcgaagtttaaagggcgggttcagaagaaaggaggcggcaagaagaaaaca
aggtga
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