Malus sylvestris (European crab apple): 126602237
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Entry
126602237 CDS
T09027
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04016
MAPK signaling pathway - plant
msyl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
126602237
04075 Plant hormone signal transduction
126602237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126602237
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
126602237
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box
F-box-like
LRR_At5g56370
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
126602237
NCBI-ProteinID:
XP_050125021
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All DBs
Position
15:8917509..8921206
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AA seq
646 aa
AA seq
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MSKLLGFSGKDDFCPGGIYTNPKEAGLFLSLGHHADVLFPPRKRSRISAPFVFSGGRFEK
EVSIDVLPDECLFEIFKRIPGGEERSACACVSRRWLNVLSNINTDEFSSNPTNLSFKSQD
EVSGNNSEDQEVENCGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLMIRGSNSVCGVT
NLGLKAISHGCPSLRVLSLWNVSSVGDEGLCEIAKRCHLLEKLDLTQCPAISDKGLIAIA
KKCPNLTDVSLEFCSNIGNEGLQAIGQCCPNLRSISIKNCRLVGDQGIAGLLSSTSYVLT
KVKLQALTISDVSLAVIGHYGLAVTDLVLTSLRNVTQRGFLVMGNGQGLQKLKSFTVASC
QGVTDTGLEALGKGCPNLKQFCLRKCLFVSDSGLVSFCKAARSLESLHLEECHRITQFGF
FGALSTGGSKLKSVAFASCLGLKDVNFGSPAVSPCQSLRSLSIRRCPGFGNVGLALLGKL
CPQLEHVDFSGLEAITDAGFLPLVENCEAGLVKVNLSGCVNLTDKVVSSLADLHGWTLKA
VNLEGCRRVSDAGLAAIAGNCTLLSDLDVSKCGITDFGIASLAHADQLNLQILSVSGCPL
VSDKSLPALVKIGQTLLGLNLQHCNAISSSTVDRLVEQLWRCDILS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagctactcggtttctccggtaaagatgatttttgccctgggggaatatacaca
aaccctaaagaagctggcctcttcttgtctcttggacaccatgcggatgtcctatttcct
cctcgcaagaggtctcgcatcagtgcccccttcgtttttagcggaggacgttttgagaag
gaggtgtcgatagatgttctaccagatgagtgcctctttgaaatctttaaacggatacct
ggaggtgaggaaaggagtgcttgtgcatgtgtttccaggcggtggcttaatgttttaagt
aatatcaatacggacgaattcagcagcaacccaaccaacctatctttcaagtctcaggat
gaggtctctggaaataattctgaggatcaggaagttgagaattgtggatatctttccagg
agcttggaaggaaaaaaggcaacagatgttagacttgctgctattgctgttggaactgct
agtcgtggcggattgggaaagcttatgatccgaggaagcaattctgtttgtggggtgaca
aaccttggccttaaggcaatatcccatggctgtccttccctgagggttctttctttgtgg
aacgtgtcctctgttggagatgagggcttgtgtgagattgctaagcgctgtcatctgtta
gagaagcttgacctcacccagtgtcctgcaatatctgataagggtttgattgcaattgcc
aagaagtgccctaatttgactgacgtatcacttgagttttgttccaacattggaaacgaa
ggtcttcaagctattggccagtgctgccccaatctccgatccatttcaatcaagaattgc
cgtcttgttggggatcagggaattgctggtttgctatcttccacctcttatgtcctgaca
aaggtgaagcttcaggctttgaccatctctgatgtgtctcttgctgttattggacactac
ggcttggctgtaactgatcttgtccttaccagcctccggaacgtgactcagaggggtttc
ttggtcatgggcaatggtcagggactgcagaagttgaagtccttcactgttgcatcctgt
caaggtgttacagatacaggtcttgaagcactaggaaaaggttgcccaaacttgaaacag
ttttgccttcgcaaatgtctattcgtatctgacagtgggttggtgtcattttgcaaagca
gcaagatctcttgagagccttcatttggaggagtgccacaggatcacccaatttgggttt
tttggtgctctttccactggtggttcaaaattgaagtctgtagcttttgcttcctgcttg
ggattgaaagatgtaaactttggatcgcctgctgtgtctccatgccaatctctgcgatca
ttgtccattcggaggtgtcctggatttgggaacgttggcctggctcttttgggtaagctt
tgccctcaactggagcatgtagacttcagtggtcttgaagctataacagatgctgggttt
ctcccactggttgagaactgtgaggctggcctggtaaaggttaatctcagcggttgtgtg
aatctaacagacaaagtggtttcatccttggctgacctacatggttggactctgaaagcc
gtaaaccttgaaggctgtagaagggtcagcgatgcaggcttggcagctattgcagggaac
tgcacattgcttagtgatcttgacgtctcaaagtgtggaatcaccgattttggaattgca
tctctagcgcatgcagaccagctaaatctccagatcctctccgtgtctgggtgcccttta
gtatcagacaagagcttgcctgccttggtgaaaattggtcagacccttcttggtttgaat
cttcagcattgcaacgcaatcagcagcagcactgttgaccggctcgtggagcagctatgg
cgttgtgacatactttcctag
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