Malus sylvestris (European crab apple): 126602256
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Entry
126602256 CDS
T09027
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126602256
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126602256
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126602256
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
DUF6338
AF_0924
zf-C3H2C3
Prok-RING_4
zf-RING_4
DUF3487
Motif
Other DBs
NCBI-GeneID:
126602256
NCBI-ProteinID:
XP_050125041
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All DBs
Position
15:50194289..50199945
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AA seq
455 aa
AA seq
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MGRLMSTMNLAVVLVAVAVVLFGRFCITDANVVLIGNNVTLSFDDLEASFAPAVKGSGEC
GVLYMAEPPDACSTLTNQVEQGTNRSSPFVLIVRGGGCSFEDKVRRAQKAGFKAAIIYDN
EVSSVLVSMAGNSAGIKIYAVFVSKASGELLKKYAGLTNMELWLIACFENSAWSIMAISF
ISLLAMSAVLATCFFVRRHRIRRERPQASRVREFHGMSKRLVKAMPSLIFTAVLEDNCTS
RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARANTGDLPASES
TPLLSSSPSSVASSVLSSMRSSIASSSAIQIGPALSRNPSLSHSHSYASTSHIQQSLRSS
YRQSPSISASRSSMDLRNVSSQRSHASYFVSPNSFGYPSLLPPNSRYISVGHFPSPSNAS
PSYISSSSHRQHPLHCSESAATFSPFSSAQSLPEC
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggggagattgatgagcactatgaatctggcggtggttctggtggcggtggcggtggtt
ttgttcggccgattttgcatcaccgacgccaatgtggtgctgatcgggaacaacgttact
ctctctttcgatgacttggaggctagtttcgctccggcggttaagggttcgggggaatgc
ggagtattgtatatggcagagcctcctgatgcgtgctcgacattgactaatcaagtcgaa
caaggcacgaatcgtagctccccttttgttttgatcgtgagaggaggagggtgtagtttt
gaggataaagttagaagagctcaaaaggcaggcttcaaagctgcaattatctacgacaac
gaagttagcagcgtcttggtttcaatggcaggaaattcagctggtataaaaatatatgct
gtgttcgtttcgaaagcttctggtgaactactaaaaaagtacgctggacttactaacatg
gagctgtggctaattgcgtgctttgagaattcagcgtggtcaatcatggcaatctctttc
atttcattgcttgccatgtctgcagtgctggctacttgttttttcgttcgtaggcatcga
ataagacgagaaaggcctcaagcttctcgtgttcgagaatttcatgggatgagcaagcgc
ttagtaaaagcaatgccaagtttgatatttaccgcagttttagaggacaactgtacatca
agaacatgtgctatatgtcttgaggactatagtgttggagaaaaactcaggattctgcca
tgtcgtcataaatttcatgctttctgtgtggattcctggcttacttcatggagaaccttt
tgtccagtttgcaagcgtgatgcaagagctaacacaggtgatctacccgcctcagaatcc
acaccattgctttcatccagtccatcctctgtggcatcttctgtactttcatctatgaga
tcatcaatagcatcatcttcagcaatacagataggaccagcattgtcacggaacccttca
ctttctcattctcactcttatgctagcacaagtcacattcagcagtctcttaggtcctcc
tatcgccagtccccttctattagtgcaagcagaagttcaatggacctccgaaatgtctcg
tcccaaaggtctcatgcttcctattttgtatcacccaattcctttggttacccatcttta
ttacccccgaattcaagatacatatctgttggacactttccaagccctagcaatgcatca
ccaagctacatcagttcttccagtcatcgacagcatccactacattgtagtgaatcagct
gcaacgttttctcctttttcttctgctcaatctcttcctgagtgctga
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