KEGG   Malus sylvestris (European crab apple): 126602321
Entry
126602321         CDS       T09027                                 
Name
(RefSeq) uncharacterized protein LOC126602321
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03022  Basal transcription factors
msyl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    126602321
  09124 Replication and repair
   03420 Nucleotide excision repair
    126602321
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msyl03021]
    126602321
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126602321
Transcription machinery [BR:msyl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     126602321
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     126602321
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 126602321
NCBI-ProteinID: XP_050125114
LinkDB
Position
15:10869320..10871926
AA seq 193 aa
MVVTNSNSQNREIVVRKRIASIFNKREEDFSSLREYNDYLEEVEDMTFDLIEGIDVPAIE
AKIAKYQEENAEQIMINRARKAEELAAALAASKGHPIQNETDAGLSQGSQAGFGAGTQGQ
YAPTVSGQPRPTGGMGPQPLPLGGGGHDLHGYAVDDEEMVKLRAEKGGRAGGWSGEISRK
RALEEALGSIWIC
NT seq 582 nt   +upstreamnt  +downstreamnt
atggtggttaccaattctaattcccagaacagggagattgtggtcaggaagaggattgca
agcatattcaataaacgagaagaggatttttcttccttgagagaatacaatgattacttg
gaggaagtggaggacatgacatttgacttgatcgaaggaatagatgttcctgctattgaa
gcgaaaattgccaagtaccaggaagaaaatgctgaacaaataatgattaacagagctcgt
aaggctgaagagcttgctgcagctctcgcagcaagcaagggacatcccatacaaaatgaa
actgatgcgggtctgagccaaggctcacaagcaggatttggtgctggtacacagggccag
tatgctcctacagtttcagggcaaccacgtccaaccggcggcatgggtccacaaccacta
ccacttggaggaggggggcatgatctgcacggatacgctgttgacgatgaagaaatggtg
aagctgcgagcagagaagggtggtcgggcaggagggtggagtggagagataagcaggaag
agggcacttgaagaagcccttggtagcatttggatttgttag

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