Malus sylvestris (European crab apple): 126602341
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Entry
126602341 CDS
T09027
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126602341
Spliceosome [BR:
msyl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
126602341
Other components
Complex C specific factors
126602341
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
126602341
NCBI-ProteinID:
XP_050125134
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Position
15:complement(54077670..54080843)
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AA seq
875 aa
AA seq
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MDDYQEMERFGMEEDYEDAQWIGGEFYYRKRKDKPVQTKDDVLYGIFTADSDDDDDNDGS
RKRRKDRRVDLTKPVSFVSTGIVMPNQEVDDNSKQQNDDKRPGLGATNGLGFGAATGSGL
GFKNPNSDSLGGEEEEEEVEDEQSFLPTAFGKKIKEGAERRHKEREKMKLLKLTSRQSQS
RGVSEERQFAGLGAKGGGDGGLGAFEKHTKGIGMKMLKNMGYKGGGLGKNEQGILAPIEA
KLRPKNMGMGFNDYKETEVKRPSLQELEAEKPSKPLPAATSTKKKPSWKKNKTNKDHYVS
AKELLAQKQEEGTEVLVHKVVDMRGPQVRVLTNLENLNAEEKAREEDLPMPELQHNVRLI
LDLAELDIQKIDRDLRNERDTAISLNQEKERLETEVARQKQHLDNLEDIRTVIDRLGEEN
SMGTLTLDSLTKGFRDLQKRYADDYKLCNLSCIACSFALPLFIRMFQGWDPLRNPSHGLD
VISSWKALLHGEGESEQYLDIWDSSMSPYTKLLSEVVVPAVRIAGVNTWQPKDPEPMLRF
LESWENLLPPSVLHSILDMVIFPKLKDAVDLWEPHRDTVPIHVWVHPWLPLLGHKLEDLY
HTIRFKLSNVLGAWHPSDGSAYTILSPWKKVFDAASWEQLMYRFIVPKLQLVLQEFQVNP
ADQTLDQFNWVMSWASAIPIHLMVDILEKFFFTKWLQVLYHWLCSNPNFEEVLNWYKGWK
ELIPEELHANESIRYQLNCGLDMMNRAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAA
AAAHANLGGTAQMDGIGHEMSLKDVIEAHAQQNGLLFRPKPGRMHNGHQMYGFGNVSIIV
DSLNQKVYAQTEETWSLVSLERLLDMHNNLLTRRR
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaggagatggagaggtttgggatggaggaggattacgaggacgcccag
tggatcggcggcgagttctattaccgcaagcgcaaggacaagcccgtccaaaccaaagac
gacgtcctctacggcatatttactgccgattccgatgacgacgatgacaacgacggctcc
agaaaacgcaggaaagaccgaagggtcgacctcaccaagcccgtcagttttgtctccaca
ggaatcgtcatgcccaaccaggaggtcgacgacaattcaaagcagcaaaacgatgataag
cggcctggcctcggcgccaccaatggccttggatttggtgccgctacgggttccggttta
ggttttaaaaatccgaattcggattctttgggtggcgaggaggaggaggaggaggtggag
gatgagcagagttttttaccgacggcttttgggaagaagataaaggagggagcggagagg
agacacaaggagagggaaaagatgaaattgctcaagcttactagtcgtcagtctcagagt
agaggagtttctgaagaacgtcaatttgcaggactaggagcaaagggcggtggggatggg
ggtctgggggccttcgagaaacacaccaagggcattggaatgaagatgcttaagaacatg
ggctacaaaggaggcggacttgggaagaacgagcaaggcattctcgctcctattgaagcc
aagctgaggccaaagaatatgggcatgggtttcaatgattacaaggagacggaggtcaag
cggcctagcttgcaagaattggaagctgaaaagccgagcaagcctttgcccgctgccacc
tccaccaaaaagaagccttcctggaagaagaacaagactaacaaggaccattatgtctct
gccaaggagttgttagcccagaagcaggaagaaggcacagaggtccttgtgcacaaggtg
gttgatatgcgcggacctcaggttcgagtcttgaccaatctggagaatttgaatgccgaa
gagaaagcaagggaagaggatcttcccatgcctgagctacagcacaacgtcaggttgatt
ctggacttagctgagctcgatatccagaagattgacagggacctgaggaatgagcgggac
acggccatcagcttgaaccaggagaaagagaggttggagacggaggtggccaggcagaag
caacacctggataacttggaggatattaggaccgtcatagatcgactgggagaagagaat
agcatgggaacattgacgctggactccctgacaaagggctttcgtgacctgcagaagaga
tacgccgatgactataagttatgtaacttgtcttgcattgcctgctccttcgctctgcct
ctgtttattaggatgtttcaaggctgggatcctcttaggaacccctcgcatgggttggat
gtaatatcttcttggaaggctttgcttcatggagagggggagagcgagcaatacctggat
atttgggatagctcaatgtccccttacaccaaattgctttccgaggtggtggtacccgcc
gtgaggattgctggcgtcaatacatggcagcccaaggaccctgaacccatgcttcgcttt
ctggagtcttgggagaacttgctgcctccttctgtccttcattccatactggatatggta
atctttcctaaattgaaggacgcagttgacttgtgggaacctcaccgggacactgttccc
atccatgtgtgggtgcatccgtggctaccactcttgggacacaagttggaagacttgtat
cacacaatacgattcaagttgagtaatgttctgggtgcttggcacccaagcgatggatct
gcctataccatactctcaccgtggaagaaggtgtttgatgccgcgagttgggaacaactt
atgtatagatttatagtacccaagttgcagcttgtcttacaagaattccaagtgaaccct
gcagatcagacacttgatcaatttaattgggtgatgagttgggcttctgctattccaatt
catctaatggtagatatattggagaaatttttcttcaccaagtggctacaggttttgtat
cactggttatgttcgaacccgaactttgaagaggttttaaattggtacaaaggttggaag
gaactcattcctgaggagcttcatgcaaatgaaagtatccggtatcagcttaattgtggt
cttgacatgatgaatcgggctgttgagggtatggaggtggtccaacctggtttgaaggag
aatattagctaccttagggtgcttgagcaaaggcaatttgaggcacagcagaaagcagca
gcagcagcacatgcaaacttgggtggcactgctcaaatggatggcattggtcacgagatg
agtttgaaagatgttattgaagcccatgcgcagcaaaatgggctgctatttaggcctaag
cctgggaggatgcataatggtcaccagatgtatggctttggtaatgtaagcataatagtt
gactccctaaatcaaaaggtatatgcccaaacagaggaaacttggtcccttgtatccctt
gaaaggttgctggacatgcacaataatttacttacaaggagacgctga
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