Malus sylvestris (European crab apple): 126602383
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Entry
126602383 CDS
T09027
Name
(RefSeq) ABC transporter B family member 13-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126602383
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126602383
04147 Exosome [BR:
msyl04147
]
126602383
04090 CD molecules [BR:
msyl04090
]
126602383
Enzymes [BR:
msyl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
126602383
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
126602383
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126602383
CD molecules [BR:
msyl04090
]
Proteins
126602383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_29
ABC_ATPase
AAA_30
AAA
RsgA_GTPase
P-loop_TraG
nSTAND1
AAA_23
Motif
Other DBs
NCBI-GeneID:
126602383
NCBI-ProteinID:
XP_050125181
LinkDB
All DBs
Position
15:complement(591739..600021)
Genome browser
AA seq
1245 aa
AA seq
DB search
MEEVELASDKFSDGNPLPKMDKPTNSTKQRSVSFLGLFAAADKVDCVLMFLGSVGACIHG
GVLPVFFVLFGRMIDSLGHLAMNPQQLSARISEYALYLVYLGLVLFASAWIGVAFWTRTG
ERQTARLRMKYLQSVLNKDINFFDTEARDTNIIFHISSDAILVQDAIGDKTGHALRYLSQ
FLVGFAIGFTSVWQLTLLTLAVVPFIAIAGGAYTIIMSTLSEKGEAAYAEAGKVAEEVIS
QIRTVYSFGGEDRAIEAYSTSLNKALKLGKKTGVAKGVGVGFTYGLLFCAWALLLWYASI
LVRHHDTNGGKAFTTIINVIFSGFALGQAAPNLGAIAKGRAAAGNIMTMIDSDSKSCKVT
DNGIVLPKVSGQIDFCEVGFTYPSRSNMVFDNLSFSIGAGKTFAVVGPSGSGKSTVISMI
QRFYHPVSGKILLDGHELGTLQLKWLREQMGLVSQEPALFATTIASNILFGKEDADLDQI
MEAAKAANAHSFIEGLPDGYNTQAGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSA
LDAESELVVQQALEKIMLHRTTVIVAHRLSTIQDVDTIVVLKNGQVAESGNHSDLMSKKG
EYANLVSMQVLERGKDSGLVSGHSSRESSFRGTTNNYPQEDKAISTKQQKPSDQTSSAAA
PVWELVKLNAPEWPYAILGSVGAVLAGMEAPLFSLGITHILTVFYAPGGSQIKHVVDRIA
LIFVGLAAVTVPIYLLQHYFYTLMGERLTTRVRLLMFKAILSNEVGWFDLEENNTGSLTS
TLAANATLVRSALADRLSTIVQNLSLTVTAFVIAFTFSWRMAAVVSASLPLLIGASITEQ
LFLKGFGGDYNRAYSRATSVAREAIANIRTVASFGCEERISLQFSLELNKPNKQAVLRGH
ISGFCYGLSQFFAFCSYALGLWYASVLIKDKDSNFGDIMKSFMVLIVTSLCIAETLALTP
EIMKGSQALSPIFSILKRETAIHRDDPRSNVVANVKGDIEFKNVSFWYPARPDITIFDYL
NLRVSAGKSLAVVGPSGSGKSTVIALVMRFYDPVSGRVLIDGYDIKSLNLKSLRKRISLV
QQEPALFSTTIYENIKYGYEEASEVEVVTAAKAANAHGFISRMPEGYKTQVGEKGVQLSG
GQKQRVAIARAILKDPSILLLDEATSALDTESEKLVQEALDKLMEGRTTIMVAHRLSTIR
DANRIALLQNGRVVEMGSHEQLIGRPGSLYKQLVSLQQQKTDAID
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtagagcttgcctccgacaagttttcggacggaaacccgcttccgaaaatg
gacaaaccaacgaactcgaccaagcagcgcagcgtgtcgttcctcggactttttgctgct
gctgacaaggtggactgcgtgttgatgtttttgggaagtgttggggcttgtatccatggt
ggtgtgcttcctgtgttctttgttttattcggtcgcatgatcgattcgttaggacatctg
gcgatgaatccacaacaactgtctgcccggatttccgagtatgctttgtacttggtatat
cttggactcgttcttttcgcatcagcatggattggtgtagcattctggacgcgaaccggg
gagaggcagacagctcgtttgcggatgaagtatctccaatcagttctaaacaaggacatt
aattttttcgacactgaagccagagacaccaacattattttccacatttcaagtgatgca
attctagtgcaagatgcaataggtgacaagactggccatgctttgcgctacctttcacag
ttccttgttggatttgcgatcggttttacatcggtatggcagcttacgcttctgaccttg
gctgtggttccattcatagctattgcaggtggagcttatactataatcatgtctacctta
tccgaaaagggtgaggctgcttacgcagaagccggcaaggttgctgaagaggttatttcg
cagattcgtacagtgtactcattcgggggagaggacagagccattgaagcatactcaacc
tcactgaacaaggccctcaagctgggaaagaagaccggtgttgcgaaaggagttggtgta
gggtttacatacgggctgttgttctgcgcttgggcattgcttctctggtatgccagcata
cttgtaaggcatcatgacacgaacggagggaaagcattcacaacaatcatcaacgtcatc
ttcagcggatttgctcttggccaagctgctccaaaccttggtgcaattgcaaaagggaga
gctgctgctggtaatatcatgacgatgatcgattcggattccaaatcctgtaaggtcacg
gacaacggaatagtgttgccgaaagtgtctgggcagattgacttctgtgaggttggtttc
acctatccatcacgatcaaatatggtgttcgataacttgagcttttcgattggagctgga
aagacttttgcagttgttggccctagtggttcaggaaagagcaccgttatatccatgatt
cagcgattctaccaccccgtttcaggtaaaatactgttggatggacatgaacttggaact
ctccaactgaaatggttgcgagaacagatgggattggtaagtcaagaaccggcattgttc
gcgactactatagccagcaatattttgttcggtaaagaagacgcagacctggatcagatc
atggaagctgctaaagctgcaaatgcacattctttcattgaaggattgcctgatggctac
aacactcaggcaggagagggaggaactcagctttccggagggcaaaagcaacgaatagcc
attgcaagagcagtgctgcgaaacccgaaaatactactcttagatgaggccacaagcgct
cttgatgcagaatcagaactagttgttcagcaggcactagagaaaatcatgttgcatcga
actacagtaatcgttgctcatcgattgtccactatccaagatgtggacacaatcgttgtc
ttgaagaacggtcaggttgctgagagtggtaaccattcggacctgatgtccaagaaaggg
gagtatgcaaatctggtgagcatgcaggtactggaacggggtaaagattctggcttagta
tctggacattcttcgagagaatccagctttcgtggaaccacaaataactatccgcaggag
gacaaggcaatcagtacaaaacagcagaagccaagcgatcagaccagctctgctgctgca
ccagtatgggaattagtgaaactaaatgcgcccgagtggccttacgcaatactggggtca
gtcggtgcagttctcgctggcatggaagctcctcttttctccctcgggataactcatata
ttgacagtgttttacgctcctggcggctctcaaatcaaacatgttgttgataggatagct
ctcatatttgttggcttggctgctgtcactgtcccaatatatctcctgcagcactacttt
tatacattgatgggggagcggctcacaactcgcgttcgtttattaatgttcaaagccatc
ctttcgaatgaagttggttggttcgatttggaagagaataacaccggatcactgacatca
actttagcagcaaatgcaacgttggtgcgaagcgctctagctgaccgtctgtcaacaatc
gtgcagaatctctccctcacggtgactgcttttgttattgccttcacgtttagttggcgt
atggcagctgtcgtgagtgcctcccttcccctacttattggagcttccataactgagcaa
ctgtttctgaagggattcggaggggactacaaccgtgcctactcaagagcaacatccgtt
gcacgcgaagcgattgccaacatacgtactgtagcttcatttggttgcgaagaacggata
tcactccagttttccttggaactaaacaagccaaacaaacaagcagttctaagaggccac
atatcaggcttctgctacggtttatcgcaatttttcgcattctgttcttatgcccttggc
ctttggtatgcatcagtactaatcaaggataaagactcgaattttggagatatcatgaag
tcctttatggtcttaatagtcacttcactgtgtatagcagaaaccctagctctcacacca
gaaattatgaagggatcgcaagcgctcagcccaattttcagtatcctaaagcgagaaaca
gccatacatcgtgatgatcccagatcaaatgttgttgccaatgtcaagggagatatagag
ttcaagaatgtgagtttctggtaccctgcaaggccggatatcaccattttcgactatttg
aatttacgggtttcagcaggaaagagccttgctgtagtcgggccaagtggttcggggaag
agtacagtgattgcactggtaatgagattttatgaccccgtttctggtagagttctaatt
gatggatacgatatcaaaagcttgaacttgaaatcattgaggaagagaataagtctagtt
cagcaggagccggcattgttctccacaacaatttatgagaacataaagtacgggtacgag
gaagcatcggaagtagaggtagtgacagcggcgaaagcagcgaatgcacacggtttcatt
agtcgaatgcctgaagggtacaaaactcaagtgggagagaaaggagtgcagttatccgga
gggcagaagcagagggtagcaattgccagagcaatactgaaagatccatcaattcttctt
ctggacgaagcaacgagtgcattggacacagagtctgagaagctggtccaagaggctctt
gacaagctaatggagggtagaacaacgattatggtagcacaccggttgtcaaccattcgt
gatgcaaatcggatcgccctgctacaaaatggtagggtggtcgaaatgggaagccacgag
cagctgattggaagacccggtagtctctacaaacaattagttagtctacagcaacaaaag
acagacgcgatcgattga
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integrated database retrieval system
