Malus sylvestris (European crab apple): 126602557
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Entry
126602557 CDS
T09027
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
126602557
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
126602557
NCBI-ProteinID:
XP_050125413
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Position
15:44693963..44698884
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AA seq
679 aa
AA seq
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MSGGGCSVVWFRRDLRVEDNPALAAAVRAGGVVCVFIWAPDEEGPYYPGRVSRWWLKHSL
AHLDSSLKSLGASLITKRSTDSVSSLLEVVVSTGATQLFFNHLYDPISLVRDHRAKEVLT
AQGIAVRSFNADLLYEPWDVIDVHGRPFTTFDAFWGRCLSMPYDPDAPLLPPKRIISGDA
SRSPSDILVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLDYSNNRRKADGATT
SLLSPHLHFGEVSVRKAFHLARMKQVVWANEGNKAGEESVNLFLKSIGLREYSRYISFNH
PYSHERPLLGHLKFFPWVLDQNYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PNGEYVRKWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKTRLQEA
LSEMWQHEAASRAAVENGTEEGLGDSSESVPIAFSQDIQMEENNEPARNNPPGTRKYEDQ
MVPSITTSLVRAEEEETSLELQNLTEETRAEVPTDLIVNQEPRRDILNQGFFQTIHNNAL
PQSNAAIGLQHAVEDSTAESSSSTRRERDGGVVPVWSPSSSSYSEQFGSEDNGIGTSSYL
QRHPQSHQIMNWRRLSQTG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtggttgcagtgtggtttggttcaggagagatctgagggttgaagataac
ccagctttggcagctgcagtgagagcaggaggtgtggtttgtgtcttcatctgggctcct
gatgaagaaggcccttattatcctggaagggtgtcaagatggtggcttaaacacagcttg
gctcatctggattcctccctaaaaagtctgggtgcttctctcatcaccaaaagatccact
gacagtgtttcttctctccttgaagttgttgtttccactggtgccactcagcttttcttc
aaccacttatatgatcctatatcactggttagggatcacagggccaaggaggttttaact
gctcaaggcatagctgtgcgttcctttaatgcggatttgctctacgaaccatgggatgtt
attgatgtccatggtcggccgttcacaaccttcgatgccttttggggaagatgccttagc
atgccatatgatccggatgcaccacttcttccccctaagagaattatttcaggtgatgca
tcaaggtctccttctgatatattggtttttgaagatgaatccgagaagggaagtaatgca
cttcttgctcgagcatggtcacctgggtggagtaatgctgataaggctctgactacattt
ataaatggacccttacttgattactctaataaccgcagaaaggctgatggcgctacaaca
tctttactttctccccatttgcatttcggggaggtgagtgtgagaaaggcatttcatctt
gctcgtatgaagcaggttgtttgggccaatgaaggcaacaaggctggtgaagagagtgta
aacttgtttctgaagtctattggtcttcgggaatattcaagatacattagttttaatcat
ccttacagtcatgaaagacctcttcttgggcacctaaagttcttcccctgggtattagat
caaaactatttcaaggcatggagacaaggtagaactggctatccattggtggatgcgggc
atgagagagttgtgggccactggttggctacatgatcgaatacgagtagtagtttctagt
ttcttcgtaaaggttctgcaacttccatggagatgggggatgaagtatttctgggataca
ctcttagatgctgatcttgaaagcgatgctcttggttggcagtatatatctggtacttta
cctgatggtcgtgaatttgaccgcatagataatccacagtttgagggttacaaatttgat
ccaaatggagaatatgtgcggaagtggcttcctgaacttgctaggctaccaacggaatgg
atacaccacccgtggaatgcaccagaatctgttctacaagcagctggaattgaattagga
tcgaattaccctctacctattgtaggaatagatgcagcgaaaacccggttgcaagaagct
ttatcagagatgtggcagcacgaagctgcttcaagagccgctgttgaaaatgggactgaa
gaaggacttggagactcctcggaatcagtaccaattgccttttctcaagacatacaaatg
gaggaaaataatgaacctgcaaggaacaaccctcctggcactcggaagtatgaggatcaa
atggtcccaagcattactacttcgttggttagagctgaagaggaagaaacttctttggaa
cttcaaaatttgacagaagaaaccagagcggaagtgcctacagacttaattgtgaatcag
gaaccaagaagagacatattaaaccaggggttttttcagactattcataacaatgctctt
ccacaatccaatgctgcaatagggctacaacacgctgttgaagattcgactgcagaatct
tccagtagcactaggcgagagagggatggaggtgtagttccagtttggtctccttcaagt
tctagctactcggagcagtttgggagtgaagacaatggcattggaacaagttcgtacttg
cagagacatcctcagtctcaccaaataatgaattggaggcggctatctcaaactgggtga
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