Malus sylvestris (European crab apple): 126602633
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Entry
126602633 CDS
T09027
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Module
msyl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126602633
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
126602633
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
NosD
HEPN_LA2681
Motif
Other DBs
NCBI-GeneID:
126602633
NCBI-ProteinID:
XP_050125510
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Position
15:complement(8857352..8860166)
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AA seq
347 aa
AA seq
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MLEIPCGKTFKLKPVHFQGPCKSRSVQIKFFGTIIAPAYISGWTGCVGNSWLLFSNVDNL
MINGSGKIDGQGENWWHKPKEHQKHKALRLSNCSNLHLRGLTHVNSPRSHIYISNSENVT
LTNLNITAPESSPNTDGIHLSSSKNVSIHESTIATGDDCIAIKRNCSKINIKGIMCGPGH
GISVGSLGAQGAYETVEEVFVGNCTFTESMYGARIKTWQGGSGYARNIHFQHIHLREAKN
PIIIDQFYCNGRHDCKNSAVSVSNVTYFGVRGTSARKDAITLKCASTNCTNISMNKINIS
SWDYGSEVSAYCLNAKGTSSCTTPTVPCLNGVCEGGGDCGSEDFVFY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaataccttgcggaaagacatttaaactgaaacccgtgcatttccagggcccc
tgcaagtcgagatcagttcaaattaagttttttggaactatcattgctcctgcgtatata
agtggatggactggttgtgttggaaatagctggctactattttcaaacgtggacaacctc
atgatcaatggatcgggaaagatcgacggccagggtgaaaattggtggcataaaccaaag
gaacaccaaaaacacaaagctttacgcctcagcaactgctctaatcttcatcttagggga
cttactcatgttaatagcccaagaagccatatttatatcagtaacagtgaaaatgtaact
cttactaatctcaatataactgcacctgaatcaagccctaacacagatggaattcatctc
tcaagctcaaaaaatgtgagcatccatgaaagcaccattgcaactggggatgactgcatt
gctatcaagcgaaattgttccaagatcaatattaaagggattatgtgtggcccagggcat
ggtataagcgtgggaagccttggagcacaaggagcgtatgaaacagttgaagaagtgttc
gtgggaaattgtaccttcacagagtccatgtatggagcaaggatcaagacctggcaggga
ggttcagggtacgccaggaacatacatttccaacacatccatcttagggaagctaaaaat
ccgatcatcattgaccaattttactgcaatggtcgacacgattgcaaaaattcggcagtg
tcagtgagcaatgttacatattttggtgtgaggggaactagtgctaggaaggatgcaatc
acattgaagtgtgcaagtacaaattgcaccaacatttcaatgaacaagattaacatttca
tcatgggactatggaagtgaggtttctgcttattgtctgaatgcaaaaggaacatcaagc
tgcaccacacctactgtgccttgcctgaacggtgtttgcgagggtggaggtgactgtgga
agtgaagattttgtcttttattaa
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