Malus sylvestris (European crab apple): 126603215
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Entry
126603215 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126603215 isoform X1
KO
K24260
WD repeat-containing protein 11
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126603215
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msyl03037
]
126603215
Membrane trafficking [BR:
msyl04131
]
Endosome - Lysosome transport
Others
Others
126603215
Cilium and associated proteins [BR:
msyl03037
]
Other cilia and associated proteins
Other cilium assembly proteins
126603215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_1st
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
TPR_GEMI5
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
126603215
NCBI-ProteinID:
XP_050125941
LinkDB
All DBs
Position
15:complement(12865386..12873276)
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AA seq
1346 aa
AA seq
DB search
MSSPRASTGSTVQDCWDCMLPGPPSRNNFGSADLSLSGLLAFPSGSSISVLDVRSMQLIV
TIPMPPPTQSSSSTSSSLSPFVTSVHWTPLPLRRDLLSTEPSSSHLLLAAGDRQGRIALL
DLRLKSPILWFDTDSSPSKLAIQDLAWVQARPDSYLLASISGFSSLSLYNSSTGRCFWKY
DAAPEVLSCIRRDPFDSRHFCVVGLKGFLLSVTVLGETESDVIIKEFQIRTDSTELLKLE
RDMAGGVSGNSSSASAVFPTYAVRFAFSLQWRHILFVTFPRELVVFDLQYETPLFSATLP
RGCGKFLDVLPDPNYEFLYCAHLDGKLSTWRRKEGGQVHIMCSMEELMPSIGTSVPSPLV
LALVISQSDSTLQNIGKLYSDVPHSPFPDVDFDNPFDFCDEPLLVSKTHLISISDDGKIW
NWLLTAEGLEDNRKDDTNLGISEVPVPGTNTNIIVSSTGGLDMKVGKQIEKINGGRGRSS
NSTVSHTDLVLKISLVGQLQLLSSAVTMLAVPSPSSTATLGRGGNYPVVAVPLVALGTQS
GTVDIVDVSANAVAASFSVHNGTVRGLRWLGNSRLVSFSYSQVSEKSGGFINRLIVTCVR
SGLNRQFRVLQKPERAPIRALRASSSGRYLLILLRDAPVEVWAMTKSPIMLRSLALPFTV
LEWTLPAVPRPAQNKPATQSSSSSSPKDHSPVASDGTSSPTKASSDSKSSDGSQDDTSES
FAFALANGALGVFEIHGRRIRDFRPKWPSSSFVSSDGLITAMAYRLPHVVMGDRSGNIRW
WDVTTGYSSSFNTHREGIRRIKFSPVVPGDRSRGRVAVLFYDNTFSVFDLDSPDPLANSL
LQPQFPGTLVLELDWLPLRTDKNDPLLLCIAGADSSFRLLEINIVDKKLGYAHQPRSIKE
RFRPMPLCSPILLPTPHALALRVILQLGVKPSWFNTCSTTLDKRPHQIPGTPKSNDDLRS
YLIDLPPVGDPVVPELLLKVLEPYRKEGCILDDERAKLYAMVVNKGFSVRFAFAAAIFGE
SSEALFWLQLPRALNHLMNKMVNKSPQKAPASASVPEIDDASMLNRITSKGKSVSGTEKK
DAMQNEGQLRLMAFEPEDLWANASERIPWHEKLEGEDAIQNRVHELVSIGNLEAAVSLLL
STPPESNYFSANALRAVALSSAVSKSLLELAVKVVAANMVRNDRSLSGTHLLCAVGRYQE
ACSQLQDAGCWTDAATLAATHLKGSDYARVLLRWASHVLRAEHNIWRALILYVAAGALQE
ALAALREAQQPDTAAMFILACREIHANFISDLGNCDDESSSSIKDKPLNLPGLGPESEDV
MAVGEYYGQYQRKLVHLCMDSQPFSE
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccctagagcttcgacggggtctacagtccaggactgctgggactgcatgctg
ccggggccacccagccgcaacaacttcggatccgccgacctcagcctctccggcctcctc
gcattcccctccggcagctccatctccgtcctcgacgttcgctcaatgcagctcatcgtc
accatccctatgccccctccaacccaatcttcttcctccacctcatcctccctctcccct
ttcgtcacctccgtccactggaccccgctccctctccgccgcgatctcctctccaccgag
ccctccagctcccacctcctcctcgccgcaggcgaccgccagggccgcatcgccctcctt
gatctccgcctgaagtcccctattctctggttcgacaccgactcctccccctccaaactc
gccatccaggacctcgcgtgggtccaggcccgacccgactcctacctccttgcctccatc
tccggattctcctccctctcactctacaacagctccaccggccgatgcttctggaaatac
gacgccgcgcccgaagttctctcctgcatccgccgtgatcccttcgattcgcgccatttc
tgcgtagtcggactcaaaggattcctgctctcggtcaccgtgttgggtgagacggaatcc
gatgtcatcatcaaggagtttcagattcggactgactctaccgagttgctgaagctggag
agggacatggctgggggagtctccgggaactcgtcgtcggcctcggcagtgttcccgacc
tacgccgtgaggttcgcgttctcgctgcagtggcggcacattcttttcgtcacgttcccg
cgggagttggtggtgttcgatttgcagtacgagacgccgcttttctccgccacgttgcct
cgtggctgcggcaagtttctcgatgtgctgccggatccaaattatgagttcctctactgc
gctcatctcgatggaaagctcagtacttggcggcgaaaagaaggagggcaggtgcacata
atgtgttcaatggaagagctgatgccgtcaattggcacatctgtcccatctcctttggtg
cttgctctcgtcatctcccaatcagattcgaccctccagaacatcggcaagctttactct
gatgtacctcattctcctttccccgatgtggatttcgataatccttttgatttttgtgat
gagcctcttcttgtttctaaaacgcatttgatctccatttctgatgatggaaaaatatgg
aactggctgttgaccgctgaagggcttgaagataatcgaaaggatgatacaaacttgggt
attagtgaagtgccagttcctggtacgaatacgaacattatagtttcttctactggagga
cttgacatgaaagtcggcaaacaaatagaaaagatcaacggtggtagaggccgatcttca
aattctactgtcagccatacagacttggtacttaagattagcttagttggacagcttcag
ctcctttcttcagcagtgactatgctggctgttccttcaccttcttcaacagctactctg
ggccgtgggggaaactatcctgttgtagctgttccattggttgctttgggaactcaaagt
gggacagttgacattgttgatgtttctgccaatgctgtcgctgcaagtttttctgttcat
aatggtactgttaggggattacgatggcttggaaattctagactggtttcattttcatac
agtcaggtgagtgaaaaatctggaggtttcatcaacaggctcattgtgacctgtgttaga
agtggcctaaataggcaattccgggttttgcaaaagcctgaacgtgcacccataagagcc
ttaagagcctcttcctctggaaggtaccttcttattttgcttcgtgatgcaccagtagag
gtttgggcaatgacaaagagtcctattatgcttagatcattagctcttccatttacggtt
ttggaatggaccctcccagcagtcccacgacctgctcaaaataaacctgctacgcaatca
tcatcatcatcatcccccaaagatcactcacctgtggcatcagatgggacatcctctcca
acaaaggcatcatctgattccaagagctcagatggatctcaagatgacacttctgaaagc
tttgcatttgcactagcaaatggtgctcttggtgttttcgagattcatgggcgaaggatc
cgtgacttcagaccgaaatggccttcttcttcgttcgtatcatccgatggactaattact
gccatggcttaccggttgcctcatgtagttatgggggacaggtcaggaaatattcgctgg
tgggatgtaactactggatattcttcttcgtttaacactcatagagaaggtatccggcga
attaaattctcacctgttgtgcctggagaccgcagtagggggcgcgttgctgtactattt
tatgacaatacattttctgtatttgaccttgattctccagacccattagccaattctctt
ttacagcctcaatttcctggaacccttgtgttggaacttgattggttgcccttgcggact
gacaaaaacgatccactattattgtgcatagctggagctgatagtagctttcgccttctt
gagattaatatagttgataaaaaacttggttatgcccaccagcccagatctataaaagaa
aggttccgtcctatgcctctatgttctcctatactgcttccaacaccacatgccttggca
ttacgggtgatcttacaattgggtgtcaagccctcttggtttaatacttgcagtacaact
ttagataaaaggcctcaccaaattccaggaactcctaagtccaatgatgatcttcgaagt
tacctgatcgatttaccacctgttggtgaccctgtggtaccagaattactgcttaaagtc
ttagaaccttatcgtaaagaaggctgcatactggatgatgagagggcaaaattatatgca
atggtggtcaacaaaggtttttctgtgagatttgcttttgctgctgcaatctttggcgaa
tcctcagaagctcttttctggctacaactgcctcgtgctcttaaccatttgatgaataag
atggtaaataagtctccacaaaaagcccctgcttcagcatccgttccagagattgatgat
gcatcaatgcttaataggataacatcaaaaggaaagtcagtgtctggaacagaaaagaaa
gatgcaatgcagaacgaaggtcagctcagattaatggcttttgagccagaggatttgtgg
gcaaatgctagtgaacgtattccttggcatgagaagttggagggagaagatgctattcag
aatcgtgtacatgagctcgtctcaattgggaacttagaagctgcggttagtttattgctt
tccactcctcctgagagcaattacttctctgcaaatgctttacgcgctgttgctctttct
tctgccgtgtcaaagtctcttcttgaacttgcagtcaaggttgttgcagccaacatggtg
aggaatgacaggtcgttgtctggtactcatcttctttgtgctgtgggaaggtatcaagaa
gcttgttctcagctacaagatgctgggtgctggacagatgctgcgactttagctgctacg
cacttgaaaggatccgactatgcaagggtgttgctaagatgggcttcgcatgtcctccgt
gctgagcacaacatatggagggccctcattttgtatgttgcagctggtgcactacaagag
gcattggcagcacttcgtgaggcccaacaacctgacacggccgctatgttcatccttgct
tgccgagaaattcatgcgaacttcatctctgatttagggaactgtgacgatgaatctagt
tcttcgatcaaggacaaaccgctcaacttgcctgggttaggccccgagagcgaagacgtt
atggcagtcggtgaatattacgggcaataccaaagaaaactggtgcatctatgcatggac
tcgcaaccattctctgaatga
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