Malus sylvestris (European crab apple): 126603229
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Entry
126603229 CDS
T09027
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126603229
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126603229
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126603229
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126603229
Spliceosome [BR:
msyl03041
]
Common components
Common spliceosomal components
SR proteins
126603229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_occluded
RRM_5
NMT_C
Motif
Other DBs
NCBI-GeneID:
126603229
NCBI-ProteinID:
XP_050125965
LinkDB
All DBs
Position
15:complement(19300610..19303794)
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AA seq
246 aa
AA seq
DB search
MADSLRKKYSRSPSPWRAQSRSRSRSWSRPRSRSRSLSRPPRQRSRSRSRGRSRSRSPGR
LVAAAINPGNTLYVTGLSTRVSEKDVERHFSKEGKVASCFLVMEPRTRISRGFAFITMDS
VEDAERCIKNLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKNTRDYGYRGDRDRDRER
DRDRGRYRGGSARDDYGYRRSPRRSPYRGGRNYSPRGGSPYGGRSRRERSYSPYGSPERK
YARGSR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctctacgcaaaaagtattcacgatccccttctccttggagagctcagtcc
aggtccaggtctaggtcttggtctaggccaaggtcgaggtcaagatcattgtctaggcca
ccaaggcagaggtctcgctctagaagtcgtggcagatcaaggtccagaagtcctgggagg
ttggtggctgctgctataaatcctggaaatacattgtatgtgaccggcctatctacaagg
gtctcagagaaggatgttgaaaggcacttttcgaaggagggaaaggtagcttcatgcttt
cttgttatggagcctcggactcggatttctcgtggttttgccttcattacgatggactca
gttgaagatgctgaacggtgcattaaaaatctcaatcagtcagttctggaaggtcgatac
ataactgttgagaggtctcggaggaagcgaccaagaacgccaacacctgggcattatctt
gggttgaaaaatactagagactatggctaccgaggtgatcgtgatcgagatcgtgaacgt
gatcgtgatcgtggtaggtaccgtgggggatcagctcgtgatgactatggatataggagg
tctccaaggcgctcaccctatagaggtggccgtaattattctccaaggggcggctcacca
tatggcggaagatcaagaagagagaggtcttattctccctatggaagcccggaaagaaag
tatgctcgtggctctagatga
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