KEGG   Malus sylvestris (European crab apple): 126603348
Entry
126603348         CDS       T09027                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126603348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msyl03041]
    126603348
Spliceosome [BR:msyl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    126603348
 Complex B
    126603348
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 126603348
NCBI-ProteinID: XP_050126117
LinkDB
Position
15:complement(22385176..22390778)
AA seq 602 aa
MMTDYEGRYEGNGEDPGNYADGGSPPQPRATNHGGADDYSDSKSQHEYHDYERESSKSRE
KDRDKGRDKEKDRDKDRDRDRDRGRSKDKDKERDKDRDRDRARERDRNRDRERERDRDRD
RDRHHRDRHRDRERSERRRDKDDDGDDHYRTRDSDRRRDYDRDREDRHRRKSRSRSRGRS
EHKSRSRSRSRSRSKSKRISGFDMAPPASAMLAGAAVAAAGQIPGTSPTIPGMFPNMFPL
STGQQFAPLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGP
GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGP
SQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIKELLESFGPLRGFDLVKD
RETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHA
QQQIALQRFMLLQPPSSVATKVVCLTQVVTADELRDDTEYDDILEDMRLEGEKFGTLVNV
IIPRPRPNGELAPGVGKVFLEYADTEGSTKARTGLNGRKFGGNQVVAVFYSEDKFGEGDY
EG
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgatgacggactacgaaggaaggtacgaaggcaacggagaggaccctggcaactacgcc
gacggtgggtcccctcctcaacctcgtgccaccaaccatggcggtgccgacgattacagt
gattccaaatctcagcatgaatatcatgattatgagagagaatcttcaaagagcagagaa
aaggatagagataaagggcgtgataaggagaaggacagagataaggacagggacagggac
agggacagggggagaagcaaggacaaggataaggaaagggataaggacagggacagagat
agggctagggagagggataggaatcgggatagagaaagagaaagggaccgagacagggat
cgtgatcgtcatcacagagaccgccacagggatcgtgaaagaagtgagcgacggagagat
aaggacgacgacggcgatgatcactaccgtacccgggactctgataggcgaagggattat
gacagagacagagaggataggcacaggcgcaagtcgcggtctcgttcaaggggtagatct
gagcacaaatccagatcaaggtcacgttctcgttcacgttcaaaaagcaaaaggatcagt
ggttttgacatggcacctcctgcttctgcaatgttagctggtgctgctgttgctgcagca
gggcaaattcctgggactagtcctaccattccggggatgtttccaaacatgttccctttg
tcgaccggtcagcagtttgcaccccttccagttatgcctgttcaggcgatgactcaacag
gctactaggcatgcccgacgggtgtacgttggaggtcttcccccaacagcaaatgaacag
tcagttgctacatttttcagccaagttatggctgcaattggagggaacactgccggccca
ggagatgctgttgtcaatgtttacataaaccatgaaaagaaatttgcttttgtggagatg
agatcggttgaagaggctagcaatgcaatggctctggatggaattatttttgagggagcc
cctgttaaggtgcggagacctagcgattacaacccatctctggctgcaacactcggccca
agccagcccaatcccaatctgaacctggctgctgtggggcttacaccgggttctgctggt
gggcttgagggccctgaccgcatatttgttggtgggctgccatattacttcacagaagca
cagatcaaggaattacttgaatcctttggacctcttcgtggttttgatttagtgaaagac
agggaaacaggaaactcaaaaggctatgccttttgtgtttaccaagatctttcagttaca
gacatagcttgtgcagcactgaacggcattaaaatgggcgacaagacgctcacagttagg
cgtgctaaccaaggtgccaaccagcccaaacctgagcaagagagtgttctgttgcatgca
cagcagcaaattgcattgcagaggttcatgttgttgcaaccacctagttctgtcgccacc
aaggttgtatgtttaactcaggtagtaactgcagatgagcttagggacgatactgagtat
gatgatatcttggaagacatgaggcttgaaggcgaaaagtttggtacattagtgaatgtc
atcatcccgcgtccaagaccaaatggtgaacttgcccccggtgttgggaaggtgtttttg
gagtatgcagatactgagggttctacaaaagcccgtacggggttgaatggccggaaattt
ggtggcaatcaggtggtagcagtgttttattcggaggacaagtttggtgagggcgactac
gagggctag

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