Malus sylvestris (European crab apple): 126603424
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Entry
126603424 CDS
T09027
Name
(RefSeq) eukaryotic initiation factor 4A-11
KO
K03257
translation initiation factor 4A
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126603424
03012 Translation factors [BR:
msyl03012
]
126603424
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126603424
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126603424
mRNA cycle factors
Stress granule specific factors
126603424
Translation factors [BR:
msyl03012
]
Eukaryotic type
Initiation factors
eIF-4
126603424
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126603424
Exosomal proteins of bladder cancer cells
126603424
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
Flavi_DEAD
DUF8050
DUF2780
Motif
Other DBs
NCBI-GeneID:
126603424
NCBI-ProteinID:
XP_050126223
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All DBs
Position
15:complement(16654513..16657671)
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AA seq
412 aa
AA seq
DB search
MAAAPEGSQFDTRQYDTKMSELLATDGQEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLTECQALVLAPTRELA
QQIEKVMRALGDYLGVRVHACVGGTSVREDQRILSNGVHVVVGTPGRVFDMLRRQSLRPD
SIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRI
LVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS
RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE
NYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVADLL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcacctgaaggatcgcaatttgacactcgtcagtatgataccaaaatgagc
gaattacttgcaaccgatgggcaggaattctttacatcatacgatgaagtttatgatagt
tttgacgctatgggtcttcaagagaatcttctcaggggaatctatgcttacggttttgaa
aaaccctcggctattcagcagaggggaattgttcccttctgcaagggtcttgatgtgatt
cagcaggctcagtctggaactggaaagacagcaactttctgttccggtatccttcaacag
cttgattatagtttgacagaatgccaagccttggttcttgcacccactcgagagcttgct
caacagattgagaaggttatgagggctcttggagactatctaggtgtaagggtgcatgct
tgtgttggtggaaccagtgtccgtgaggaccaacgcattctgtcaaatggagtgcatgtt
gttgttggaactcccggtcgtgtttttgacatgcttagaaggcagtcacttcgtcctgat
agcatcaagatgtttgttttggatgaggctgatgaaatgctttcccgtggtttcaaggat
cagatctacgatatattccagcttcttccatcaaagattcaggttggtgtgttctctgcg
acaatgccgcctgaggctcttgagatcacaaggaagttcatgaacaaacctgtgaggatt
ctagtgaagcgtgatgagctcaccctggaaggtataaagcaattctatgtcaatgtcgac
aaggaggaatggaagcttgagactctttgcgatctttatgagaccttggccattacccag
agtgtcatttttgtcaatactcgacgcaaggttgactggttgactgacaagatgaggagc
agagaccatacagtttctgccacccatggagacatggaccagaacaccagagacatcatc
atgcgggaattccgttctgggtcatctcgtgtgttgatcaccactgatcttttggctcgt
ggtattgacgtgcagcaagtctcccttgttattaactatgatctgcccacccagcccgag
aactacctccacagaattggtcgtagtggacgttttggaaggaagggtgttgccatcaac
ttcgtaacaaaggatgatgagaggatgctgtttgacatccagaagttctataacgtggtt
gtggaggagctgccatcaaacgtcgctgatctcctctga
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