Malus sylvestris (European crab apple): 126603489
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Entry
126603489 CDS
T09027
Name
(RefSeq) crossover junction endonuclease EME1B-like isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03440
Homologous recombination
msyl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126603489
03460 Fanconi anemia pathway
126603489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126603489
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
126603489
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
126603489
NCBI-ProteinID:
XP_050126301
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Position
15:49867536..49872344
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AA seq
574 aa
AA seq
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MSEPQQPIVLSDEEEDRNVLSSTPPPFQSFHHSKRRRTELNPYPNPNPPPPPTVLVLDDD
DDDGPTSSRYLVLDESPCTKAPSDFQTQTRVSHSQHKFSGADGLVCLESDDECESGCGRG
KEEEKESAGGGSGVLKDLGWISGFDESPCSFDTCLSGRDDLQHVSGSSSQPTAFQEDIGQ
VFGYPGKENIMDQTRNIVKQRRKTKAISKNENITQAMDKKKMAKEERIRQREEKNKKEHE
EKLQRTYLKAEAAKMKKLEKEKQKLEKGKFALKSIVAEIDTKVLELGSVGGSLLTKISER
GLTYRITSNPIERSIIWTMTVPEHISQTSPEGTEVKYILLVYEAEEFCNLVINESLLDQV
LSVRSRYPTYTVCYLTNRLMAYIDKREQEVYKNPTNHNGWRRPPVEEVLAKLTTNFIKVH
SRLCIDEAELAEHIVGLTCNLSSCQFRKKLTRLDVNANESLTIKDCIDRDLIRKSSWLKA
LVAIPKVQPRFAIAIWKKYPTMKLLLSVYMDPNIPVCEKEFLLKDLITEGLLGDDRRLGE
VCSKRVYRILMAQSGSIKTDDVEDGADLFRRQLT
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcctcagcagccaatcgtcctctccgacgaagaagaagaccgaaatgtgctc
tcgtcaacccctcctccatttcaatcattccaccactctaagagacgccgaaccgaactc
aatccatacccgaacccgaatcctcctcctcctcctactgttctcgtcctcgacgacgac
gacgacgacggtcccacctcctcccgctacttggtcctcgatgagtctccatgcacaaaa
gcaccttcggacttccaaacccaaactagggtttcacattcccaacacaagttctccggc
gccgatggattggtatgcttggaatctgatgacgagtgtgaaagtggttgtggaagggga
aaggaggaggagaaagaatcagctggtggtggttctggtgtgctgaaggacttaggttgg
atatccggatttgacgagtccccatgttcttttgacacatgtttatcaggacgtgatgat
ctacaacatgtttctgggagttcttcacaacctacggcttttcaagaagatattggtcag
gtatttggttatcctggcaaagaaaatataatggatcagacgagaaacattgtgaaacag
aggagaaaaactaaagctatttctaaaaacgaaaatattacacaagcaatggacaaaaag
aagatggcgaaagaggaaaggatacgccaaagggaagaaaagaataaaaaagagcatgaa
gagaagctgcaaagaacatatctgaaagctgaagcagcaaaaatgaaaaaacttgagaaa
gaaaagcaaaagttggaaaaaggaaagtttgctctaaaatccattgtggctgagattgat
acgaaagtattggaattggggtcagttggaggaagtctgcttacaaagatttctgaaaga
gggctaacataccgcataacatcaaatccaatagaaagatcaattatctggaccatgact
gttccagaacatatttcacagacttctcctgaaggaacagaggttaaatacatattgctg
gtgtacgaagctgaagaattttgtaaccttgtcatcaatgaatctcttttggaccaagtt
ttaagtgttcgaagtcgttatccaacttatacagtgtgttatctaacaaataggttgatg
gcttatattgataaaagggaacaagaagtgtacaagaacccaacaaatcataatggctgg
agacgcccacctgttgaggaggtgctggcaaaattgaccactaattttattaaagtacat
tccaggctgtgcatagatgaggctgaacttgctgaacatattgttggtttaacatgcaac
ttgtcatcctgccaatttagaaagaagttaaccagactggatgtaaatgctaatgaatct
cttaccattaaggactgcattgacagggatttaatcagaaagagctcatggttaaaagct
ttggtggctatcccgaaggtacagccgcgatttgctattgctatatggaagaagtaccct
accatgaaacttcttttgagtgtttacatggacccaaatataccagtttgcgaaaaggaa
tttctgctcaaggacttgataacagagggcttactcggcgatgacagaagattgggtgag
gtttgttccaagagagtgtacagaatacttatggcacaaagtggatccattaaaactgat
gatgttgaggacggtgctgatttgttcaggcgtcaattgacttga
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