Malus sylvestris (European crab apple): 126603864
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Entry
126603864 CDS
T09027
Name
(RefSeq) protein NPGR1
KO
K21843
tetratricopeptide repeat protein 7
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126603864
Membrane trafficking [BR:
msyl04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
126603864
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_CcmH_CycH
TPR_14
TPR_1
TPR_19
TPR_16
TPR_12
TPR_8
TPR_11
TPR_17
ARM_TT21_C
TPR_4
Motif
Other DBs
NCBI-GeneID:
126603864
NCBI-ProteinID:
XP_050126821
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Position
15:complement(4739990..4746178)
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AA seq
714 aa
AA seq
DB search
MLCACSGEQFKFEEPPQSPESLATRDFSASCLSSRTGDWESKFEDIQVDEAESTLKEALS
LNYEEARALLGRLEFQRGNFDAALQVFQGIEIRNLTPRMAKAIVERTRQRKPRTKGDTVV
LPSVMSMHSVSLLIEAILLKAISLGELGRYIDAAKECKVILDTVESALPNGMLQDIGEDC
KLPDMFHKALELLPNLWTKAGYLDEAITAYRRALIKPWNLDPERLAAIQKSLACTLLYGG
VEANLPPHSQIWGITMPKNNTEEAILLLVILMKKVALREIKWDPEIMDHLTYALSLTGLY
ELLADHVEQALPGLYRRAERWYFLALCYSACGKNEVALNLLKKVAGCSEAKNKPHFPSFL
LGAKLCSQDPIHAREGIEFSHKAIDLVNHQCEHFMGQCHKYLGVCYGGAARASLSDSERV
SFQSESLNSLNLAALNGKEDPEVVFSLGLENAVQRNLDAAFSNAMKYSDMVAGSSGQGWK
LLALIVSAEQQFKDAETIVDFALDEAGRVDQLELLRLKAVLQVAQEHPKQAIETYRMLLT
VVQAQRDQKAKNSEQEKPFDSEAFVERNLEKEAWRDLATVYTKLGLWTDAEICANKAKLI
EFYSPHSWHTTGKLFEAQSQYKEALISFSVSLSIEPDYVPSIVSTAEVLMKLGSQSLPIA
RSFLMNALRLEPTNHEAWLNLGLISKKEGLLQQAADFFQAAHELQLSAPVRSFL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgtgcttgttcaggagagcaattcaaattcgaggagccgccgcagtccccggag
tcccttgccacgagggacttctcggcgagttgcctttcgtctaggaccggcgactgggag
tccaaatttgaagacattcaagtggatgaagctgaatccactcttaaagaagctctatct
ttgaattatgaggaagctagagctttgttggggaggcttgaattccaaagggggaatttt
gatgctgcacttcaggtgtttcaaggtattgaaattagaaatttaaccccgcggatggcc
aaggctatcgtggagagaactaggcaaagaaagccgcgcacgaaaggagatactgtggtt
cttcccagtgtaatgtcaatgcactctgtgagcctacttattgaagcaatattactcaag
gcaatatcattgggagaacttggaagatatatagatgctgcaaaggagtgcaaagttatt
cttgatacggttgaatcagctttacctaatggaatgcttcaagacattggcgaggactgc
aaattgccagacatgtttcacaaagcgctcgagctgctccccaatttatggacaaaggca
ggctatcttgatgaggctattactgcatatcgccgggctctaatcaagccatggaatttg
gatccggagaggttagctgctattcagaaaagcttagcttgcacattactctacggcggt
gttgaagcaaaccttccccctcattcacaaatatggggcataactatgcctaaaaataat
acagaagaagcaattctgttgttggtaattcttatgaaaaaggtggctttgcgagagata
aagtgggatccagaaatcatggatcatctgacttatgctctttctcttaccggattgtat
gaattattagcagatcatgtggagcaggctcttccgggattatatagacgagcggagaga
tggtactttcttgctctttgttatagtgcctgtggaaaaaatgaagtagccttgaacctt
ttgaaaaaggttgcaggctgttcggaagcaaagaacaagcctcacttcccttcttttctg
ttgggagcaaaattgtgctcacaagatccaattcatgctcgcgaagggatagaattttcg
cataaagctattgacttggtgaatcatcaatgcgagcatttcatgggtcaatgccataaa
tatcttggtgtttgctatggcggtgcagcaagagcttctctgtcggattctgaaagagtg
tcttttcaaagtgaatccttgaactctctaaaccttgctgctcttaacgggaaggaggat
cccgaggtggtgtttagtctgggcctcgaaaatgcagtgcaaagaaatctggatgcagct
ttcagtaacgcaatgaagtactcagatatggtggctggcagctcaggacaaggttggaag
ctattggcgcttatagtttccgcagagcagcagttcaaggatgctgaaacaatagttgat
tttgctttggacgaagccggaagagtggatcagttagaactgctcagactgaaagctgtg
cttcaagttgctcaggaacatcctaagcaagcaatagaaacctacagaatgttgctaact
gttgtccaagcacaaagggatcaaaaagcgaaaaactccgagcaagagaaaccctttgat
tctgaggcatttgtggaaagaaatttggaaaaggaagcctggcgggacttggcaaccgtt
tatacaaaacttggtttgtggactgatgcagaaatatgcgccaacaaagccaagttgatt
gaattctattcaccccatagttggcatacgacaggtaagttatttgaagctcaatcgcaa
tacaaggaagccctgatttccttctcggtctcattgtcgatagagccagattatgttcca
agcatcgtttcgactgcagaagtgttgatgaaactcggtagccagtcactccctatagca
agaagctttctaatgaacgcgctgcgattagaaccgacaaaccacgaggcgtggttgaac
ctcggattgatttcaaagaaggaaggattgttacaacaagcagcagacttttttcaagct
gcgcacgagcttcagctttcagctccagttcgaagctttctgtaa
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