Malus sylvestris (European crab apple): 126603988
Help
Entry
126603988 CDS
T09027
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00531
Glycosaminoglycan degradation
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
126603988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
msyl00536
]
126603988
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
126603988
Glycosaminoglycan binding proteins [BR:
msyl00536
]
Heparan sulfate / Heparin
Enzymes
126603988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
126603988
NCBI-ProteinID:
XP_050126992
LinkDB
All DBs
Position
2:1483337..1486379
Genome browser
AA seq
542 aa
AA seq
DB search
MGSDILQMGFIFWVSFSFLVCTVNSKVGFGGGGVEGTVRINGRDAIAKIDDDFICATLDW
WPPEKCDYGTCSWGRASLLNLDLNNAILLNAIKAFSPLKLRLGGTLQDKVIYATPDNKQS
CDAFQKSTSEMFGFTQGCLPMNRWDELSSFFQKAGAKIIFGLNALTGRTINSNGTATGDW
DYTNSESFIRYSVKNNYTVHGWELGNELCGHGIGTTVSASQYVSDTTALKKIVQDIYKGV
EPKPLILSPGGFFDAKWFKDYTDKTTTSLDVVTHHIYNLGPGVDEHLIEKILDPSVLDSI
SSTFSNLHGILKRSATSAAAWVGEAGGAYNSGRHLVSNTFVYSFWYLDQLGMSASYDTKT
YCRQTLIGGNYGLLNTTTFEPNPDYYSALLWHRLMGRNVLATSFSGPKKIRAYAHCAKQS
KGITVLLINLHNTTTAEVRVAFNTTWTLRHKHKSHKPHRSHVTKLQQGPRSSTEREEYHL
TPKDGNIQSQTMLLNGNALRVDSSGIIPSLNPVYVNASEPILVGPSSIVFAHIPYVVPPA
CR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgatatcttgcaaatgggattcattttctgggtttcttttagtttcttggtt
tgtactgtaaattcaaaggtggggtttggaggaggaggtgtggaaggtacagtccgcatc
aatggcagagacgccattgccaaaatcgacgacgattttatttgtgcaactcttgattgg
tggccacctgagaaatgcgactatggtacatgcagctggggtcgtgcttctctcctcaat
ctggatctaaacaacgctatcttgttaaatgctataaaggctttctcaccattgaaactt
agattgggtggcacattgcaagataaggtgatatatgctacaccagataacaagcaaagc
tgtgatgcttttcaaaaaagcacttctgagatgtttggtttcactcagggctgcttgcct
atgaatagatgggatgaattaagctctttttttcagaaagcaggggctaagattatcttc
ggattaaatgctctcaccggacgaacaattaattcgaacgggactgcaactggagattgg
gactacaccaattcggagtctttcatccgttacagcgtcaaaaacaactacaccgtacat
ggttgggagctcggaaatgaattgtgtggacatggaatcggaacaacggtctcggcgagt
cagtatgtatccgatacaactgctctgaagaagatagtacaagacatctacaagggtgtt
gaaccaaagccgctgatcctatctccgggaggatttttcgatgcgaagtggttcaaagac
tacacagataaaaccaccacatccttagacgttgtcactcaccatatatataatctaggg
ccaggggttgatgaacaccttattgaaaagattctcgatccatctgttcttgacagtatt
tctagcacattcagcaacctccacggcatcctaaagcgttctgcaacttcggcagctgcg
tgggttggggaagctggaggtgcttacaacagcggtcgccatcttgtctccaatacattt
gtatatagtttctggtatttggatcagcttggtatgtcagcatcttacgatacaaaaacc
tactgcagacagacattgattggaggaaactatggtttactcaacactactaccttcgag
cctaatcccgactattacagtgctctgctttggcatcggttgatgggaagaaatgtcctc
gcaacgagcttttctggaccaaaaaagatacgtgcttacgcacactgcgcaaaacaatct
aaggggattacggtgctactgatcaacctgcacaataccaccacggctgaggtcagagtt
gccttcaacactacctggacgctgcgacataaacacaaatcacacaagcctcatagatca
catgtgaccaagctccaacagggtcccagaagttcaacagaaagagaagaataccatcta
acaccgaaggacggaaatatacaaagccaaaccatgctgctcaatggaaacgctttgcgc
gtagattcatccgggatcattcctagcttaaaccctgtgtatgtaaatgcatcggaacca
attttggtcggtccgtcctcaattgtatttgctcacataccatacgtagttccccctgct
tgcaggtag
DBGET
integrated database retrieval system
