Malus sylvestris (European crab apple): 126604037
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Entry
126604037 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126604037
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
msyl03015
mRNA surveillance pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126604037
09122 Translation
03013 Nucleocytoplasmic transport
126604037
03015 mRNA surveillance pathway
126604037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126604037
03041 Spliceosome [BR:
msyl03041
]
126604037
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126604037
Spliceosome [BR:
msyl03041
]
Complex C
Other components
EJC/TREX
126604037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
126604037
NCBI-ProteinID:
XP_050127047
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Position
15:35121230..35126193
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AA seq
754 aa
AA seq
DB search
MSYQYPSLGNRPINLLKVTELKEELKKRSLTTKGLKDDLVKRLDEAIRIERENALTEDNG
LYGEKVVEPIAVLPKTPRSTGSGGRKRIEKVDLPVQVDTNDSARNLDQGSIQEGYVLVDK
DAGAIAEEEPVVQSTIVETNVRVTETLVAEAAVVGDNSQNTEANKGNGNSESLFDNEIPK
SLVENEDPRPVVENEDPKPQLENEDPKPQLENADPKPQLENEDPEPYLESEDPVPELECE
DPNLQLENVDPKAHLEDEDSRPQLEVDDSKPQLEKEGLEPTAKDVMVDSSAPNYQVSEVS
HLGYEVKYDSISTDSVSINEKIELKDNIIADHVKLELDVKPEMVDPSSSTVVPVSGDSHP
MDVEEPHDDKASVGEKDDNNDMNADISKKNDSADLGYSEKLNLERSSGDDSMEEDVQDSK
QIYSKYNPDDVGDMREKNVVPFVKEESHVGIVGDDISLDKMDENVEIKNHTARAEKRKLN
DQAAFGSNEPIKKRRWNSESLKVPELQSPIQTPTVTPKETFQTNSLKRNFSRSNSTMSED
APKERVVPPSQKAPTNSLRIDRFLRPFTLKAVQELLGKTGSVNDFWMDHIKTHCYVTYSS
VEEALETRNAVYNLQWPPNGGRLLAAEFVDPQEVQTRLQVSQTPAPPVASGPSVPAAPST
SQLQPSPRQPRQQQQLPPPPSLPPPPPLPTAPVAREQLPLPPPPPLPEKHDLPIVTLDDL
FRKTKSTPRIYYLPLSEEQVAEKLSAQQGRNIKQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaatatccgagtcttggcaaccgaccaatcaatcttttgaaggttacagaa
ttaaaggaggagcttaagaagcgaagtttgacgaccaagggtttgaaggatgatttggta
aaacgcttagatgaagcaatacgaattgaaagggaaaatgcattgactgaggataacgga
ctttatggtgaaaaagttgtagagccaattgcagttcttcctaagacacctagaagcact
ggttctggtgggcgtaaaaggattgaaaaagttgatttgccagttcaggttgacactaat
gacagcgctagaaacttggatcaagggagcattcaagaaggttatgttctggttgataaa
gatgctggtgccatagctgaagaggagccggttgttcaatctactattgtggaaaccaat
gttagggtcactgagactctggtggctgaggcagcagtagttggtgataattcacagaac
actgaagctaataagggaaatgggaattcagagtccctatttgacaatgagattccaaag
tccctagtggagaatgaggatccaaggcccgtagtagagaatgaggatccaaagcctcag
ctggagaatgaggatccaaagcctcagctggagaatgcggatccaaagcctcagctggag
aatgaggatccagagccctatcttgagagtgaggatccagtgcccgagctggagtgtgag
gatccaaatctccagctggagaatgttgatcctaaggcccacctggaggatgaggattca
aggccccaactggaggttgatgattcaaagccccaactggagaaagagggattagagcct
acagccaaggatgtgatggtcgactcttctgctccaaactaccaggtatctgaggtcagc
catttagggtatgaagtaaaatatgattctatttctactgattctgtgtcaattaatgaa
aagattgaactaaaggataatataattgctgatcatgtcaaattagaattagatgttaag
ccggagatggtggacccatcatccagtactgttgtcccagtcagtggtgattcacatcca
atggatgttgaagagccacacgatgacaaagcttctgttggagagaaagatgacaacaat
gatatgaatgctgacataagtaagaaaaatgatagtgccgatttggggtattcagaaaaa
ttaaatttagagagaagttctggagatgattctatggaggaagatgtgcaggacagtaaa
caaatttattcaaagtataatcctgacgatgtgggagatatgcgtgagaaaaatgttgtt
ccctttgtgaaagaggaaagtcatgttggtattgtgggagatgatatttccctggacaaa
atggatgaaaatgttgagatcaagaatcatactgctcgtgctgaaaaaagaaagcttaat
gatcaagcagcatttggaagcaatgagcctataaaaaagcgcaggtggaactctgaaagt
cttaaagttccagagctccaaagccctattcaaacgccgacggtcacacccaaggaaact
ttccagaccaacagtttgaagcgtaacttttcgaggtcaaactctactatgagtgaggat
gctcccaaggaacgtgttgttccaccatcacagaaggctccaactaattctctgagaatt
gatcgttttctgcgacctttcaccctgaaagctgtgcaagaacttctaggaaaaactggg
tccgttaatgatttctggatggaccacatcaaaactcattgctatgttacttattcgtca
gtggaagaagccttggagacacggaatgctgtgtataacttacagtggcctcccaatggt
gggcgcctcttagcggccgagtttgttgatccccaggaagtgcaaacacggcttcaggtt
tctcagactcctgctccacctgtcgccagtggtccttctgttcctgctgccccgtccacc
tcgcagctgcagccttctccccgtcaacctaggcagcagcagcagcttccaccacctcct
tctctccctcctccaccacccttgcctacagctcccgtagcaagagagcagcttcctctg
cctcccccacctcctttaccggagaagcatgatcttccaattgtcaccctggatgatctc
tttcggaaaaccaagtcaactcctcgaatctattacttgcctttgtcagaggaacaagtg
gctgaaaaactttcagcacaacagggaagaaacatcaagcagtag
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