Malus sylvestris (European crab apple): 126604085
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Entry
126604085 CDS
T09027
Name
(RefSeq) class V chitinase-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00520
Amino sugar and nucleotide sugar metabolism
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
126604085
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
126604085
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Motif
Pfam:
Glyco_hydro_18
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
126604085
NCBI-ProteinID:
XP_050127125
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Position
15:complement(11386987..11388665)
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AA seq
376 aa
AA seq
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MSSKTTTLPLLLSALLFLIQLNVSAGQAAVKGAYWYWDSGLPASSIDSTLFTHLFCAFAD
LNVDTYQVTVSSSNQAQFSSFTQTVQQNNPSVKTLLSIGGGGGAALADTFAAMASQPDRR
KSFIDSSISLARSYNFHGLDVDWEYPSTTTHMTNFGTLLTELRAAVANESQTSGNTALLL
TAAVHRSADYYTINYPFESISNSLDWINVMAYDFYGSAWESSRANTGPPAALYNATASQI
NGNAGITSWIGAGVAANKIVLGLPFYGYAWRLVNADDHGLFAPADGPANAGTDGSMVYHQ
IRDFISQNAAETVYNATVVTNYCYSGTTWIGYDDTESISAKVSYAKEEALLGYFAWQVSG
DDSNWALSQTASTTWG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaaaactacaacccttccattactcctttccgccctccttttccttatccaa
ctcaatgtctccgccggccaagccgcggtcaagggcgcctactggtattgggacagtgga
cttccagcctccagcatagattccaccctcttcactcatcttttctgtgcatttgctgac
ctcaacgtcgacacgtaccaagtcacagtttcttcctctaaccaagcacaattctcaagc
ttcacccaaacagtccaacaaaacaacccttctgtcaaaaccctcttgtccattggaggt
ggtggcggtgctgcccttgcagacacattcgctgcaatggcgagccaacccgaccggcgt
aagtcattcatcgattcctccatcagtctagctaggtcatacaacttccacggcctcgac
gttgattgggaatatccatccaccaccactcacatgaccaacttcggcacccttctcacc
gaattgcgtgcagccgtggccaatgagtcgcagacatctgggaacacggcattgctttta
accgcagctgtacatcgctcagcggattactacaccataaattacccctttgagtccata
tcaaacagtctggactggatcaacgttatggcttacgacttctatggctctgcctgggag
tcaagcagagccaacactggcccacctgctgcgttatacaatgccacagctagccaaatt
aacgggaatgccgggatcacatcttggattggggcaggtgtggctgccaacaagatagtc
ctaggccttccgttttatggctacgcttggcgcttggtcaacgccgatgaccatggactt
tttgctccggctgatggaccggctaatgccgggacagatgggagcatggtttaccaccag
ataagggattttataagccagaatgcggcagagacggtgtacaatgcgacggttgtaaca
aactattgctactccgggactacatggattgggtacgatgatacggagagtatctctgcc
aaggtttcatatgctaaggaagaggcacttcttggatactttgcttggcaagtcagtggt
gacgacagcaattgggctctttctcaaacagcttcaactacttggggatga
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