KEGG   Malus sylvestris (European crab apple): 126604113
Entry
126604113         CDS       T09027                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
msyl  Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msyl04121]
    126604113
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126604113
Enzymes [BR:msyl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     126604113
Ubiquitin system [BR:msyl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126604113
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    126604113
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-RING_2 zf-C3HC4_3 DEAD zf-C3HC4_2 zf-RING_5 ResIII zf-rbx1 zf-ANAPC11 zf-RING_UBOX DEAD_2 Prok-RING_4 AAA_34 SWI2_SNF2
Other DBs
NCBI-GeneID: 126604113
NCBI-ProteinID: XP_050127182
LinkDB
Position
15:complement(10152400..10157866)
AA seq 884 aa
MEEEDPVKLFMSLDQWQDPPPDADDFAALSSQDQDSQSLSSSSDTFMLGFVIASIVGIQY
YSGTISGREMVGLVREPLNPYDSNAIKVLNTETRQVGHIERSVAAVLAPLIDSNLISVEG
IVPNMRSKPNRFKIPCQVHIFARFEAFPSAKSAILQSGLQLISDSDASFTLSESVVVKEK
KAERGSKSVDEIFKLVEESASRKGALQALEPPNQVIKSELFVHQKEGLGWLVHRENSGDL
PPFWEEKGGSFVNVLTNYHTDKRPEPLRGGIFADDMGLGKTLTLLSLIAFDKYGSSDVSV
LDDNKMREDESLSVSFSKKGKRGAPSKKGTGSLKKRKTEDASAGSNVEEKCLSVDDKSLG
YCSTKTTLVVCPPSVFSTWVTQLGEHTRPGRLKVYMYYGERTSNAEELKEYDIVLTTYSI
LATENSWTESPVKEIEWWRVILDEAHMIKNVNAQQSQAVTSLKAKRRWAVTGTPIQNSSF
DLFSLMAFLRFEPFSVKSYWQSLVQRPLAHGNQKGLVRLQVLMETISLRRTKDKGLIGLP
PKTLEICYVELSGEERELYDQMEGEAKSVVRSYIDADSVVRNYSTVLSIILRLRQICTDV
ALCPSDLKSLLPSNNIEDASKNPELLKKIVEVLQDGEDFDCPICISPPTDIVITCCAHIF
CQACILKTLQRTKPCCPLCRHALSHSDLFSAPQTASDSDNTASSKTTLSSKVNALLKLLV
TSREQNPLTKSVVFSQFRKMLIYLEEPLKAAGFKTLRLDGSMNAKKRAQVIKEFGMTGQD
APTILLASLKASGTGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRIVAR
DSIEERILELQDKKKKLAKEAFRGKAAKDRRDVGADDLLVLMGM
NT seq 2655 nt   +upstreamnt  +downstreamnt
atggaggaagaagatcccgtaaaactcttcatgtccctcgatcagtggcaagaccctccg
cccgacgccgatgactttgccgctctttcttcccaggaccaagactcgcagtctctctct
tcttcctcggacaccttcatgctcggcttcgtcatcgccagcatcgttggaattcaatac
tattcaggcaccatcagtggccgagaaatggtgggtcttgtccgcgaacccctcaatccc
tacgactccaacgccatcaaagtccttaataccgaaacgcgtcaggtgggtcacatcgaa
cgctccgtcgccgccgtccttgcccccttgatcgactcgaatttgatttccgtcgaaggc
attgtgcccaatatgcgctctaagcccaacaggttcaagattccttgccaagttcacatc
tttgcaaggtttgaagcctttccctctgcgaaatcagcaattttgcaatctgggttgcag
ctgatttccgattccgatgcgtctttcactctatccgagtcagtggttgtcaaggagaag
aaggctgagaggggttccaagagtgtagatgagattttcaagctggtggaggagagtgcg
agcagaaagggggccttacaagcattggaacctccaaatcaagtgatcaaatcagagctg
tttgttcaccagaaagaaggcttgggatggttggtgcatagagagaattctggtgacttg
cctcccttttgggaagagaaaggtggttcttttgtgaatgtcttgaccaattaccacact
gataagcgaccggagcctctaagaggtgggattttcgctgacgatatggggttgggtaag
actttaactttgctgtctttgattgcgtttgataaatatggtagttcagatgtaagcgta
ctagatgataacaaaatgcgtgaggatgagtctttgtctgtttcttttagtaagaaaggt
aagaggggtgccccaagtaaaaaaggcaccgggtcactgaaaaaacgcaaaactgaggat
gccagtgctggcagcaatgtggaagaaaaatgtttgagtgtagatgataagtctttgggg
tattgtagtaccaagacaacattagttgtgtgcccaccttctgtattttcgacttgggta
acacaactaggagagcacactaggccgggtagactgaaggtgtatatgtactacggagag
cggactagcaatgctgaggagcttaaggagtatgatatagtgttgactacatatagtatt
ttggctactgaaaattcttggacggaatcccctgttaaagagattgagtggtggagggtc
attttggatgaggcacacatgattaagaatgttaatgctcaacaaagtcaagctgttact
agtttgaaggctaagcgaaggtgggcggttactggaacacccatccagaatagctcattt
gatttgttttctttgatggcatttttgcggtttgagcctttttcagttaagagctactgg
caaagcttggtgcagcgcccacttgctcatggcaaccaaaaagggctcgtacggctgcag
gttctaatggaaaccatttctttgcgaagaacaaaagacaaagggctgattggattacct
cctaaaactttagagatttgttatgtggaactctctggtgaagaacgtgaactatatgat
cagatggaaggagaagcaaagagtgttgtgaggagttacattgatgctgatagtgtagtg
cgcaactattccactgtacttagcatcatcttacgacttcggcagatctgtactgatgtg
gcattgtgcccttctgatctcaaatcacttctcccttcgaacaatattgaagatgcgtcc
aagaaccctgagctgctgaaaaagattgttgaggtgctgcaagacggtgaagattttgat
tgtcctatttgcatttctccgccaacggatattgttattacttgctgtgctcacattttt
tgccaagcttgtattctgaaaacccttcagcgcacaaaaccctgctgtcccctttgccgc
catgctttatcacattctgatctgttctcagcccctcaaacagcttctgacagtgacaac
acagcatcctcgaaaacaaccttgtcgtcaaaagtaaatgctctcttaaaacttcttgtt
acatcgagggagcaaaacccacttacaaaatcagtagtgttttcccagttccgaaagatg
ctgatatatcttgaagagccactcaaagcagctggttttaagactttgaggttagatggg
tccatgaatgcaaagaaaagggcacaagtaatcaaagaatttgggatgacgggacaagat
gcgcccacgattttgcttgcaagtctcaaggcttcaggaacaggtataaaccttacagct
gcaagtagagtgtatttgttggagccatggtggaacccagcagttgaggaacaggcaatg
gatcgcgttcaccggattgggcagaaagaagatgtgaagattgtgaggattgttgctcga
gacagcattgaagagaggatactagagttgcaagacaaaaagaagaaacttgctaaggaa
gctttccgggggaaggctgcaaaggatcggagggatgtaggggccgatgatcttcttgtc
ctcatgggcatgtga

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