Malus sylvestris (European crab apple): 126604128
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Entry
126604128 CDS
T09027
Name
(RefSeq) DNA polymerase alpha catalytic subunit-like
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126604128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msyl03032
]
126604128
Enzymes [BR:
msyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
126604128
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
126604128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
126604128
NCBI-ProteinID:
XP_050127201
LinkDB
All DBs
Position
15:25460070..25470830
Genome browser
AA seq
1533 aa
AA seq
DB search
MADDEQATVATSRRRSRGPEASARAGALERLKALRHGGRRSEAGGFQIKMEDRIYDTVGD
DEYDAIVAKRREEVRGFIVDDNGLGYCDEGEEEDWTRAGPSSDESDGGDRPKRKKVEKKE
KEKDKEPRPKKPSSSLTAAAAMMGKQRLSSMFTSSVFGKNRDNERGRGLNCDSIVDDVIA
EFAPDEDDREKRRRGQSNKILVPNLSNKSEIGFDRGVNLARKVELDRVVANSSDSLVGSV
QINEGFEENEGKKEVGLEGGDPPIEQGHEFSEGGGAIEEKNVDFVEEKVEPVKKKEEVFT
LNAKIKEDNKDPALSAMVGWKAVRTGGDGNVGGGVVEANSGSNSEEISQCDLEEDGSLLF
YMIDAYEEFYGANGGKLYLFGKVKAGSTYQSCCVVVENMQRCVYAIPKSSVFHSDEIMKL
EKDAEESRISSREFRTKLHDMASGLKSDMAKKLLDLNISAFSMAPVKRSYAFERSDIPAG
ENYVLKINYPFKDPPLPADLKGETLLALLGTHTSALELFLVKRKIKGPSWLSVSGSEFRP
VSQRVSWCKFEVVVKSAKDIQVSNCPKKTAESPPVVVTAISLKTINFDEIVSASVICCHK
AKIDTPVLASEWTKPGMLSHFTVVRKLDGGIFPMGFTKEATEKNSKAGSNVLSIESTERA
LLNRLMIELHKLDSDVLVGHNISGFDLDVLLRRAKVCKVPNSMWSKIGRLKRSGMPNLAK
GSSIFGSGASLGILSCISGRLLCDTYLCSRDLLREVSYSLTQLAKTQLNKDRKEIMPHDI
PRMFQKSEFLMELIEYGETDAWLSMELMFHLSVLPLTRQLTKISGNLWGKTLQGARAQRV
EYLLLHAFHAKKYIVPDKIPHLKETISAKRKTDNGVDDKNVDEVDVNFDNEAKKDHGKGK
KGPAYAGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSEGLAPRLPSSK
KIGLLPELLKDLVERRRNVKKWMKTASGLKIQQLDIQQQALKLTANSMYGCLGFPNSRFY
AKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIAKAKAIALKVIQ
EVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKNEMPYEVIERKGLDMVRRDWSLLS
KELGDFCLSKILSGGSCEDVVESIHDALMKVQEEMRNGEVALEKYVITKSLTKPPEAYPD
AKNQPHVQVALRLKQSGYSAGCSAGDTVPYIICCEQGTSISNSTGIAQRARHPDELKRED
GKWMVDIDYYLSQQIHPVVSRLCASIQGTSPGRLADCLGLDSSKFKGNSSEAVRDDPSSL
SLLLDDAERFCSCEPLILACPSCSNTFSCPTILNSISKSITEKQSKSQAEESTSDFWHTL
RCSKCPGEGDMGRLSPVMIANQVKRQADSFVSMYYRGFMTCDDESCQYNTRSLNLRLVGD
AERGTVCPDYPRCNGRLVRKYTEADLYKQLSFFCHILDTERCIEKMEASTRLPVEMELAK
VRPIADLAASTVKRIRDRCAYGWIQLQDLCVTV
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgagcaagcgacggtggccaccagcaggcggcggagtcgaggaccagag
gcgtcggcccgtgccggagccctcgaacgcctcaaagctcttcgccatggtggccgccga
tctgaagctggtgggttccaaatcaagatggaggaccgaatctatgacactgtcggagac
gacgagtacgacgcaatcgtcgccaaacgacgggaagaggtccgaggcttcatcgtcgac
gacaacggcctaggttactgcgatgagggcgaggaagaagactggactcgtgccggtccg
tcgtcggatgaatcggacggcggcgataggcccaagaggaagaaagtcgaaaaaaaggaa
aaggaaaaggacaaagagcctcggcccaaaaagcccagttcgtcgctcactgccgcggcg
gcgatgatggggaagcagaggctctcgtcgatgttcacgtcgtcagttttcgggaaaaat
agagataatgagagggggagagggttgaattgtgatagtattgtggatgatgtgattgcg
gagtttgcaccagatgaggatgacagagagaagcggaggagggggcaatcaaacaagatt
ttggtgccgaatttgagtaataagagtgaaattgggtttgataggggtgttaatttagca
aggaaggttgaattggatagagttgtggcaaatagtagtgattctttggtgggttctgtg
cagattaatgaaggatttgaagaaaatgagggcaagaaggaggtgggtttagaaggaggt
gatcccccaattgagcaaggccatgaattttctgagggtggaggggcaattgaggagaaa
aatgtggattttgttgaggagaaagtggaacctgtgaagaaaaaggaagaggttttcact
ttgaatgcaaagattaaggaagataacaaggacccggcattgagtgctatggtgggatgg
aaggcggtgaggactggaggtgatgggaatgttggtggtggtgttgtggaggccaatagc
ggctcaaatagtgaagagatttcgcaatgtgatttggaagaagatggttcactgctgttt
tacatgattgatgcttatgaagagttctatggtgctaatgggggcaagctttatctgttt
gggaaggtcaaagcaggaagtacataccagagttgttgtgtggttgtagagaacatgcag
agatgtgtatacgcaattccaaagagttctgtatttcacagtgatgaaatcatgaagctt
gaaaaggatgccgaagagtcgaggatttcatccagagaattccgtacaaagctgcatgat
atggcttctggtttaaagagcgacatggcaaagaagttgttggatctcaatatatcagct
tttagcatggcgccggttaagaggagctatgcatttgagcgatctgacatacctgcagga
gagaattatgtacttaagatcaattatccattcaaggatcccccacttccagcagatctt
aaaggagaaacattgcttgctcttctaggaacacataccagcgctttggagctttttctt
gttaaaaggaagataaaaggcccgtcttggttatcagtttcaggttcagagtttcgtcca
gtttcacaacgggtaagttggtgcaaatttgaggtggttgttaaatctgcaaaagacata
caggtctcaaattgcccaaagaaaactgcagagtctcccccagtggttgttactgcaata
agtttgaaaactattaattttgacgaaattgtctctgcatctgttatctgctgtcacaag
gccaagattgacactcctgtgttagcatcggagtggacaaaacctggcatgctgagccat
tttactgttgtccgtaaacttgatggaggcatatttccaatgggcttcactaaggaggct
acagaaaagaattctaaggctggatcaaatgttttaagcatcgaaagcactgaaagggct
ttactaaatcgtttgatgattgaattacacaagttggatagtgatgttcttgttggacac
aatatatctgggtttgacctggatgtccttctccgcagggctaaggtttgtaaggtgcca
aactccatgtggtccaaaataggccgcctcaagcgttctgggatgcctaaccttgcaaaa
ggaagctccatttttgggtctggagcaagtctagggatcttgtcctgcatttctggtcgc
cttttgtgtgatacatacttgtgttcccgtgacttattaagggaggttagctattctttg
acacaacttgcaaagactcagctgaataaagaccgaaaggagatcatgccacatgatatt
cctagaatgttccagaaatcagaatttctaatggaactgattgaatatggcgagacagat
gcatggctgtctatggaactcatgtttcatttgagcgttcttccccttacacgtcagctg
acaaagataagcggtaatctgtggggaaaaaccctacaaggtgccagggcacaaagagta
gaatatcttttactgcatgccttccatgcaaagaagtatattgttccagacaagattcct
catttgaaggaaacaatttcggcaaagcgtaaaacagataatggtgttgatgataaaaat
gttgatgaggtggatgtaaattttgataatgaggcaaagaaggatcatgggaaaggcaag
aaaggtcctgcctatgcaggtggattggtattggagccaaaaagagggttatatgacaaa
tatatattacttctggacttcaatagtctttacccgtctattattcaggaatacaatatc
tgtttcacaacagtggaaagatcttcagaaggattggctcctcgtttaccatctagtaaa
aaaattgggcttctacctgagttgttaaaagatctagttgaaaggaggagaaatgtaaag
aaatggatgaagactgcatctggtctcaagatccagcaacttgacattcaacagcaagct
ctaaagctgactgcaaatagtatgtatggatgcttggggtttccaaattcgagattttat
gcaaagccactggctgagcttataacactgcaagggagagagattttgcaaagtaccgtt
gatcttgttcagaacaatttgaacctagaggtaatctacggtgatactgattcaatcatg
atttatagtggactggatgatattgcaaaagcaaaagcaattgcattgaaagtcatccaa
gaggttaacaagaagtataggtgtttggaaattgatcttgatgggttatacaagagaatg
ctgcttcttaagaaaaagaaatatgcagctgtgaaggtgcaattcaagaatgagatgccc
tatgaggttattgagcgtaagggtcttgatatggttcgacgggactggagcttactttca
aaggaactgggagatttctgcctaagtaaaattttatcaggagggtcatgcgaggatgtt
gttgaatcaattcatgacgctctgatgaaggtgcaagaggagatgagaaacggagaagta
gcacttgaaaaatatgtcatcaccaagtcattgactaaaccacctgaagcatacccagat
gccaaaaaccaaccacatgttcaggtggcattaagattaaagcaaagtggttattctgct
ggctgttctgctggcgatacagtcccctatatcatttgctgtgagcaggggactagtata
agtaattcaacggggattgctcaacgtgctcgacatccggatgaattaaaacgagaagat
ggaaaatggatggttgacattgattactacttgtcccagcagattcatcctgtggtatca
cgtctttgtgcttcgattcagggtaccagccccggacgcttggctgattgtttaggactt
gactcttctaagttcaaaggtaactcaagtgaagctgtcagagatgatccttccagcttg
tcccttcttcttgatgatgcagagagattttgcagttgtgagcctttgatcttggcatgt
cctagctgctccaatacttttagttgtccaactatcttgaattccatttctaagtcaatt
accgaaaagcaaagtaagtcacaagctgaggaatctaccagcgatttttggcatacacta
cgctgttcaaaatgcccgggggaaggagacatgggcagactgtctcctgtaatgatagcc
aaccaggtgaaaaggcaagcagacagttttgtttcaatgtactacaggggctttatgacg
tgtgacgacgaatcttgccaatacaacacacgaagtctcaacctccggcttgttggcgat
gctgagagaggaacggtttgtccggactatcctcgctgcaacggacgtcttgtaagaaag
tacacggaagcagatctgtacaagcagctctcctttttctgccacatcttggatacagaa
cgctgcatagaaaagatggaggctagcactagactgccggtagagatggagttggccaaa
gttcggccaatcgcggatttggctgcttcaacagttaaaaggattcgggaccgttgtgcc
tacggatggatacagctgcaagatctttgtgttacggtttaa
DBGET
integrated database retrieval system
