Malus sylvestris (European crab apple): 126604277
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Entry
126604277 CDS
T09027
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126604277
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126604277
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126604277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_16
zf_RING_Vps8
DUF6476
zf-RING_4
Prok-RING_4
HTH_63
RINGv
Motif
Other DBs
NCBI-GeneID:
126604277
NCBI-ProteinID:
XP_050127433
LinkDB
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Position
2:complement(9557325..9560642)
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AA seq
291 aa
AA seq
DB search
MREAVVGFFVVVYLQLLQLSSANIVLQPSGILIPDLPAKYAVTVGGSEICGALLVADPLD
ACLPLRYGFRSNETDITRFALVERGECTFEDKVQHAQNAGFHAVIVYDNRREKLVHMTIH
SKNVTIHAVFVSKASGEMLKEHARGEEGECCIFVLPNEKAWSVFAVCFISFLTVLGLLVI
ALCAQRNWSWTTQGRNQLPKSADTKIVDALPCFTFSSAGLDECHIEETCAICLENYKDSE
ILKVLPCQHEFHSSCVDSWLKKWGRNCPVCKNDIRKKIANAEIKRKTWLYN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagggaagccgtagtgggattctttgtggttgtttatcttcagcttctccaacttagc
tcagctaacattgttctccaaccatctggaattcttatccccgaccttcccgccaaatat
gctgttactgtcggcggctctgaaatatgtggagctttgcttgtagcagaccctttggat
gcctgcttgcctctgcgctatggttttcgatcaaatgaaactgatataacaaggtttgct
ttagtagaaagaggtgaatgtacttttgaggataaagtgcaacacgctcaaaatgccgga
tttcatgctgtgattgtttacgataatagaagagaaaaattggttcacatgacgatacac
agcaagaatgttacaattcatgccgtatttgtttccaaagcatctggtgaaatgctaaag
gaacatgctcgtggggaagaaggggaatgctgcatcttcgtattaccaaatgaaaaggcc
tggtcggtgttcgctgtatgtttcatctcatttctaactgtattgggtctccttgtgatt
gccctctgtgctcagagaaactggagctggactactcaaggaagaaaccaacttcctaaa
agtgcggataccaagattgtggatgctctaccttgcttcacattcagttctgccggtttg
gatgaatgccacattgaagaaacttgtgccatctgccttgagaattacaaagattccgaa
attcttaaagttctcccctgccaacatgaatttcattcaagctgtgtggattcatggctg
aaaaaatgggggagaaactgccccgtgtgcaagaacgatataagaaagaaaattgcgaat
gctgagatcaagagaaaaacctggttatacaattag
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