Malus sylvestris (European crab apple): 126604322
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Entry
126604322 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126604322 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126604322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126604322
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126604322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Zn_ribbon_RanBP
GTP_EFTU_D4
Mg_chelatase
fragilysinNterm
Motif
Other DBs
NCBI-GeneID:
126604322
NCBI-ProteinID:
XP_050127485
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Position
15:complement(7585086..7591374)
Genome browser
AA seq
770 aa
AA seq
DB search
MPRKVNYGIDYDDGYDAYEDHDYDYDDDDEYGIEKNVTGKAVESKRETERPKVWSCSICT
YDNEENTSACDICGVLRNPLSKSNRDNKTVEGRCKDSGVSIMAKSIFASLPHQKPKQAVL
FHQQKDDSMIEEGNNFHRLGDFKGPIHEFLNTFNVHNKHRIDIAPFKFDVPSPDDVVYNG
LWSSKTGSKAGVIDLKSSKASPNVAKKSSAVSAQSSAEWSGSSSTMAQKREQGRLDKEIQ
LENQTVSYHHGSSGAITIQENGKFSESSSASQPTSRRDSGVESTSEIRGKSQSVTSGLKN
MTLDARSGYSNSVSVRESRSQADYKPEKWMLPDQAIDTLTQLNLAIVGHVDSGKSTLSGR
LLHLLGRISQKEMHKYEKEANLQGKGSFAYAWALDESTEERERGITMTVAVAYFDSRKYH
VVVLDSPGHKDFVPNMISGATQADAAILLIDASVGAFEAGMDVGKGQTREHAQLIRSFGV
DQIIVAINKMDIVEYSKDRFDLIRQTLGTFLRSCGFRDSSVSWIPLSAMENQNLVAAPSD
VRLSSWYRGPYLLDAIDSLKPPTREFSKPLLMPICDVIKSSSQGQVSACGKLEAGALRSG
FKVLVMPSGESGTVRLLERDSQACAIARAGDNVAVTLQGIDGGRVMAGGVLCHPSFPVAV
AKHLELKVLVLDVTTPILIGSQLEFHIHHAKEAARVVKISSLLDPKTGKLTRKAPRCLTA
KQSAVVEVSLHAPVCVEEFSNSRALGRAFLRALGSTIAVGVVTRIIEEQK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtaaactacggaattgattatgatgacgggtacgatgcttatgaagat
catgattatgattatgatgatgatgatgagtacggaatagaaaagaatgtaacaggcaaa
gcagttgagtcaaagcgcgaaactgaaaggcctaaggtctggagttgttccatttgcacg
tatgataatgaagagaatacgtctgcatgtgacatttgtggggttcttcgcaaccctttg
tctaaaagcaatagagataataaaacagttgaaggcagatgcaaagattctggagtatcc
ataatggccaagtctatttttgcatcattgccgcaccagaagccaaaacaggctgtacta
tttcatcagcagaaagatgattctatgatagaagagggcaataacttccacaggcttggg
gatttcaaaggacctattcatgaattccttaacacttttaatgttcataacaaacaccgt
attgatatagctcctttcaagtttgatgttccatccccagatgacgtggtttataatgga
ttgtggtcctccaaaacaggttcaaaagctggtgttattgacttgaaatcttcaaaagct
tccccaaatgttgcgaagaagagtagtgcagttagcgcacaatcaagtgctgaatggtca
ggtagttcatctacaatggcacaaaaaagggaacaaggtagattagataaggaaattcag
ttggagaatcagacagttagttatcaccatggaagtagtggcgcgattactatacaagaa
aatggtaaattttcagagagttcatctgcttcgcagccaacaagcagacgtgacagtggg
gttgagagcacttctgaaattaggggcaagtcacagagtgttaccagtggcttgaaaaac
atgactttggatgctcgatctggatattctaatagtgttagtgttagagaatctcgttca
caagcggactataaacctgagaagtggatgcttcctgaccaagctatagatacactgact
caactgaatcttgcaatagttggtcatgttgattctggaaaatcaacactctctggtagg
ttgcttcaccttttgggaaggatatctcagaaagaaatgcacaaatatgagaaagaggca
aacttgcagggaaaggggtccttcgcatatgcttgggcattggatgagagtaccgaagaa
agggaaagaggaataactatgacagtggctgttgcatactttgattccagaaaatatcat
gttgttgtgctcgactctcctggccataaagattttgttcctaacatgatatctggggca
acacaagctgatgctgcaatacttctcatagatgcctctgttggtgcattcgaagctggt
atggatgttggcaagggacagacaagggagcatgcacaacttattagaagttttggtgtt
gatcaaattatagttgctattaacaagatggatatcgttgagtactccaaggatcgattt
gatttgatcagacagacacttggaacatttctccgttcctgtggtttcagagattcttcg
gtgtcttggattccattgagtgccatggaaaatcaaaatttggtagcagctccttctgat
gtccgtttatcgtcttggtaccgtggaccttacctgttggatgcaattgattccctcaaa
cctcctacaagagagttttcaaagccattgctgatgcctatatgtgatgtcatcaaatct
tcttcacaaggacaggtgtctgcttgtggtaaattggaagcaggagctcttcgaagtgga
ttcaaggttctggttatgccttcgggagaatcagggactgtacgcttgttagaacgtgac
tctcaggcttgtgcaattgcaagggctggggacaatgtggctgttactctgcaaggcatt
gatggaggtcgtgtgatggcaggaggtgtgctctgtcaccctagttttccggttgcagtt
gcaaaacatttggaattgaaggtgcttgttttggatgttacaaccccaattttaattggt
tctcagttggaattccacatacaccacgcgaaggaggctgcgagagtggtaaagatttca
tcattgcttgatccaaagactggaaaactgacaagaaaggctcctcgctgtcttactgca
aagcagagcgcggtcgtagaggtcagtcttcatgcaccggtttgtgttgaagagttctcc
aactccagagcccttgggagggcctttttaagggcgttaggaagcaccattgctgtcggt
gttgtaacccggattatagaggagcagaagtag
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