Malus sylvestris (European crab apple): 126604381
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Entry
126604381 CDS
T09027
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126604381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126604381
Spliceosome [BR:
msyl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126604381
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
126604381
NCBI-ProteinID:
XP_050127571
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Position
2:16043176..16047183
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEDDIIVEDDADAGNMEEDVDGDLADLETLNYDDLDSVSKLQK
SQRYTDIIQKVEGALEKGSDMSNHAIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRPKFPELESLVHHPIDYARVVKKIGNEMDVTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLTKIVEACDRALALDSAKKMVLDFVESRMGFIAPNLSAIVGSAVAAKLMGTAGGL
TSLAKMPACNVQLLGAKRKNLAGFSTATSHFRVGYVEQTEIFQSTPPSLRMRACRLLAAK
STLAARVDSTRGDPSGNTGRAFREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSMGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELSNPQAHAQQLGGGAQSTYFSETGTFS
KIKRI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttgctgattcatttctcgcagaccttgatgaactatctgacaatgaagat
gatataattgttgaagatgatgctgatgctggaaatatggaagaagatgttgatggggac
ttggctgatttagaaacacttaattacgatgatctggacagtgtttcaaaattgcagaaa
tcacaaagatatacagatataatacagaaagtggaaggtgcattggagaagggttctgat
atgtcaaatcatgcaatagttttggaagatgatccggaataccagctgattgtggactgt
aatgctttgtctgttgacattgagaatgaaattgtaatcatccataattttattcgggac
aagtatcgtccaaaatttccagagctggaatcacttgtgcatcatccaattgattatgct
cgagttgttaagaaaattggaaatgaaatggacgttacccttgttgatctggaggggctt
ctaccttcagcaattattatggttgtgtcagttacagcatcaactacaagtggcaagccg
cttccagaggacgtcctcacgaaaatagttgaggcatgcgatcgagcccttgctcttgat
tcagcaaagaagatggtgcttgattttgttgaaagtagaatgggctttattgcgccaaat
ctgtctgctattgttggtagtgctgttgcggcaaaacttatggggacggctgggggtctc
acatccttagctaagatgccagcttgtaatgttcagcttcttggtgctaagagaaaaaac
cttgctgggttttccactgcaacatcacacttccgcgttggttatgttgagcagacagaa
atatttcaatctacacctccttcattgaggatgcgtgcttgtcggctcttggctgcaaaa
tcaacacttgcagcacgggtggattccacaagaggagatccatctgggaacactggaagg
gcattccgggaagagattcgtaagaaaattgagaaatggcaggagcctcctcctgcaaag
caacctaaaccacttccagttcctgattctgaacctaaaaagaagagaggtggtcgccga
ctaagaaagatgaaggaaaggtatgcgataacggacatgaggaaactggcaaacaggatg
caatttggtataccagaagagagttcgttaggggatggactgggtgaagggtatggaatg
cttggtcaggctgggagtggcaagctgcgtgtatcaatgggtcagagcaaacttgctgca
aaagttgctaagaagttcaaggaaaagaattatggaagcagtggtgctacatctggacta
acttcaagtttggcgtttacgcctgtgcagggtattgagctttcaaatccacaggctcat
gcacagcagcttggcggtggagctcaaagcacctacttctctgagacgggaacattttca
aaaatcaagaggatctga
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