Malus sylvestris (European crab apple): 126604437
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Entry
126604437 CDS
T09027
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126604437
Enzymes [BR:
msyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
126604437
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
Other ribosome biogenesis factors
126604437
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Methyltransf_31
Ubie_methyltran
PCMT
RrnaAD
FtsJ
Methyltransf_4
RsmF-B_ferredox
AcetylCoA_hydro
Cons_hypoth95
Methyltransf_11
CO4A-B_CUB_C
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
126604437
NCBI-ProteinID:
XP_050127645
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All DBs
Position
15:complement(3653663..3657441)
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AA seq
505 aa
AA seq
DB search
MARLKHKAGPPPAAADKSENRRRLNMERSAYFSRREAAKVLKLVLQGDAKKRSVGTIKSL
VYSPSVRNKKGTFALVCQTLKYLQIIQEVLNAAEVLNSKWKKQDELVYIVTYDILFGQVS
SSAIGDAEKYLMRRQEALQSALARLLVKKKVKKVEDLIALYEIPDISIPRHVRVNTLKMD
VDTALLELKKQFQVQKDDLVPDLLVLPPGSDLHDHPLIKDGSIFMQGKASSMVAAALAPK
PGWEVLDACSAPGNKTVHLAALMRREGKVIACELNEERVKRLKETIRLSGASNIKVVHGD
FLDLNPEDPQFSKVRAILLDPSCSGSGTASARLDHLLPSSAPGQGADFASTERLNKLAAF
QRKALAHALSFPEVERVVYSTCSVNQVENEDVVKSVLPLAASNGFQLETPFPKWHRRGLP
VIEGAECLIRTDPKEDKEGFFIALFSRSSSNQQEAPNGTGRDATEASKRQRNYAVPHLNL
FKTWTHAQRMWRNNSKHIHSHCHCC
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcctaaagcacaaagcgggcccgccgcctgcagccgccgataagtcagaaaac
cggcgtcgtttaaacatggagaggtcggcttacttctcccggagagaggctgcgaaggta
ttgaagctcgtcctccaaggcgacgccaagaagcggtccgtcggcaccatcaagtctctc
gtttacagtccctcagtcaggaacaagaaaggcactttcgctttggtttgccaaacccta
aaatatcttcagattatccaagaggtcttgaatgctgccgaagtactgaatagcaagtgg
aagaagcaagatgagttggtttacatagtcacctacgacatccttttcggtcaggtgagt
tcatctgcaataggtgatgcggagaagtatctcatgcgtcgccaagaagctctgcagtcc
gcactggctcggcttttggtgaagaaaaaagtgaagaaagttgaagacttgatagctctt
tatgaaattcccgatatctcaatacctcgtcatgttcgagtaaatactctgaaaatggat
gttgacactgccttactcgaattaaagaagcaatttcaggttcaaaaggatgacttggtt
cctgacttgttggttcttccaccgggtagtgatcttcacgatcatcctctaataaaggat
ggaagtatttttatgcaaggaaaggcaagctctatggtggctgcagcccttgctccgaaa
ccaggatgggaggttcttgatgcatgctcggctcctggaaacaaaactgtgcaccttgca
gctcttatgagaagagagggaaaagtgatagcatgtgaactgaatgaagaaagggttaaa
cgtttaaaagagactatcagactttctggtgcttctaatattaaggttgtgcatggagat
ttcttagacttaaaccctgaagatcctcaattttccaaggtccgggccattcttttagat
ccttcctgctctggatctgggactgcttctgcaagattagatcatttgctcccatcttct
gctccaggtcagggtgccgattttgccagcacagaaagacttaacaagctcgctgccttt
cagagaaaagcactggctcatgctttatcttttccggaggtggagagagtcgtttacagc
acatgctctgtcaaccaagtcgaaaacgaagatgtcgttaaatctgtgctaccacttgct
gcatccaatggtttccaactggaaacccccttcccgaaatggcaccgccgtggtctcccc
gttatcgagggcgccgaatgcttgattaggaccgatccgaaggaggacaaagaaggcttc
ttcatcgctctgttttccaggagctccagcaaccaacaggaggcgcctaatggaaccggc
agagacgccaccgaagcctcgaagaggcagagaaattatgcagtacctcatctcaatctg
tttaaaacgtggacacatgcgcaacggatgtggcgtaataattccaaacacattcacagt
cattgccattgttgttga
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