KEGG   Malus sylvestris (European crab apple): 126604576
Entry
126604576         CDS       T09027                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
msyl  Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msyl03041]
    126604576
Spliceosome [BR:msyl03041]
 Complex B
  Other components
   Complex B specific factors
    126604576
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 LisH_TPL NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_HPS5 DUF7165 VPS8_N Beta-prop_WDR75_2nd Beta-prop_LRRK2 zf_topless Beta-prop_IP5PC_F Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 126604576
NCBI-ProteinID: XP_050127822
LinkDB
Position
15:complement(49361835..49372027)
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQMLQSECQVSLNTVDSVETFVSDINSGRWDAI
LPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVVKQEQPERFLRLEH
LLVRTYFDPNEAYQESTKEKRRAQIAQALAAEVSVVPPSRLTALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDLYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSVDGFIEV
WDYLSGKLKKDLQYQADESFMMHEDAVLCVEFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSKGVTSVSFSRDGSQLLSTSFDSTAKIHGLKSGKALKEFRGHSSYVNDAIFTSD
GARVITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDASVNSVHLYPKNTDHIIVCNKTS
SIYVMTLQGQVVKSFSSGKKEGGDFLSACVSPKGEWIYCVGEDRNMYCFSHQSGKLEHLM
KVHEKEVIGISHHPHRNLVATYSEDCTLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctaccttagaaatcgaagctcgagatgtcatcaagattgtgcttcaattttgcaaa
gagaattctttgcaccaaacgtttcaaatgttgcagagtgagtgccaggtatctttgaac
actgtcgacagcgttgagacatttgtttctgacataaatagtggaaggtgggatgcaatt
ttgcctcaagtggctcaacttaagcttcccaggaataaattggaggatttgtacgagcag
attgtactcgaaatgattgaacttcgagaattggatactgctcgtgctatcttaagacag
actcaggtaatgggtgtagtgaagcaagaacaacctgaaagattcttgcgacttgagcac
ctccttgtcagaacctattttgatccaaatgaggcttatcaagagtcaacaaaagaaaag
cggcgtgctcaaattgctcaagcacttgctgcggaagttagtgtggtgccaccatcaaga
ttaacagctctaattggtcaggctctgaagtggcagcagcaccaaggattgcttccccca
ggaacacagtttgacttatttcggggaacagctgctatgaaacaagatgtggatgacttg
tatccaacaactctttcacacacaataaagtttgggacaaaaagtcatgcagaatgtgcc
cggttctcaccagatgggcagtttcttgtctcttgctcggttgatggatttattgaggtg
tgggattacttaagtgggaaactcaagaaggatcttcagtaccaggctgatgaaagtttc
atgatgcacgaggatgctgtcctctgtgttgaatttagccgagattcagagatgcttgca
tctgggtcacaagatggaaagatcaaagtttggcgtattaggactgggcagtgcttgcgc
cgtcttgaacgtgcacattcaaagggtgtcaccagtgtttccttctctcgtgatggaagc
cagttacttagtacatcatttgacagcactgcaaaaatccatggcctaaaatctgggaag
gcgttgaaagaatttcgtggacattcatcttatgtaaatgatgcaatctttacaagtgat
ggagctcgtgtaattactgcatctagcgattgcacagtcaaggtctgggatttgaagact
acagactgtctgcagacattcaagccacctcctcctttaaggggaggtgatgcttctgtg
aattctgttcatctttacccaaaaaatacagatcacatcattgtatgtaataagacgtca
tccatttatgtcatgacacttcaagggcaggttgtgaagagcttttcatctggtaaaaag
gaaggtggagattttttgtcggcttgtgtgtcacctaaaggggaatggatttactgtgtt
ggtgaagacaggaatatgtactgtttcagtcaccaatctggtaaactagagcatctaatg
aaggtccatgaaaaggaggtaattggcatcagccaccatcctcacaggaatcttgtcgcc
acatatagcgaagactgcacactgaagttatggaagccttga

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