Malus sylvestris (European crab apple): 126604665
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Entry
126604665 CDS
T09027
Name
(RefSeq) ABC transporter E family member 2-like isoform X1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126604665
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
126604665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
AAA_22
AAA
Fer4_6
Rad17
AAA_23
RsgA_GTPase
AAA_29
Fer4_9
NACHT
Fer4_2
nSTAND3
TsaE
Fer4_10
SRP54
Fer4_21
AAA_33
AAA_5
Fer4_4
ORC-CDC6-like
AAA_24
Fer4_16
Fer4_7
AAA_13
Fer4_17
Mg_chelatase
Fer4_8
Motif
Other DBs
NCBI-GeneID:
126604665
NCBI-ProteinID:
XP_050127906
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Position
15:76149..81057
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AA seq
622 aa
AA seq
DB search
MADRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLNKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFKNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGEVLNQKDERDMKEELCADLELNQVIERNVGDLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEEIETYARYRYPSMSKTQG
NFRLRVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDIVENSDVEIPEFNVSYKPQ
KISPKFQSTVRHLLHSKIRDSYTHPQFNSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL
CLGKISFDEYILMSASIYSMQPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFV
VEHDFIMATYLADRVIVYEGKPSIDCTANCPQSLLTGMNLFLSHLDITFRRDPTNYRPRI
NKLESTKDREQKAAGSYYYLDD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccggttgacccgtattgcaatcgtgagctccgacagatgcaagccaaagaag
tgccgccaggaatgcaagaagagctgccctgttgtcaagactggtaaactatgtattgag
gttacccctgcagccaagattgcttttatctcggaagaattgtgcattgggtgcggtatc
tgtgttaagaaatgcccatttgaagcaattcaaatcatcaacttaccgaaggatttaaac
aaagatacgacccatcgttatggtcctaacactttcaaactacacaggttaccagtccca
aggccaggtcaagttctaggtttggttggaactaatggcattgggaagtcgactgccctc
aaagttttggctggaaagttgaaaccaaatttaggccgtttcaagaatcctccagattgg
caggaaatcttgacctacttccggggatctgagctgcagaattattttacccgtattctg
gaagataatttgaaggccattataaagccccagtatgttgatcacattccaaaagcagtt
caaggaaatgttggggaggtgctcaaccagaaagatgagagggatatgaaggaagaactg
tgtgctgaccttgagctgaaccaggttatagaacgtaatgtaggggatttatcaggtggg
gagcttcaaagatttgccattgctgtcgtcgccatacagaatgcagagatatatatgttt
gacgaaccttcaagttatcttgatgtgaaacaaaggcttaaagctgcccaagttgtccga
tctttactcaggcctaatagctatgtaattgttgtggagcatgatcttagtgtcttggat
tacttgtcagacttcatttgctgtttatatgggaaacctggtgcatatggagttgtgact
cttccattctcagttagagaaggaatcaacatcttcctggccggatttgttcctacagaa
aatcttaggttccgagatgaatctctgacatttaaggttgctgagacaccacaggaaagt
gctgaggaaattgagacatatgcacgatatagatacccatcaatgagtaaaactcaggga
aatttcaggcttcgtgtggttgagggtgaatttacagattctcaaattattgtgatgctg
ggtgagaacggaacagggaagactacatttattcgtatgctggcgggtctattgaaacct
gatattgtagaaaattcagatgtggagatacctgaattcaatgtttcttacaagcctcag
aaaatcagtccaaagtttcaatccactgtcagacacttgttacattcaaaaatccgtgat
tcatatactcatccacaatttaattcggatgtgatgaagcctcttctaattgaacaatta
atggatcaagaagttgtgaatctctctggcggtgagttgcagagggttgcattatgccta
tgcctcgggaagatcagttttgatgagtacattctaatgtccgcctctatttactcaatg
cagccagcagatatttatctgatagatgaaccaagtgcttatcttgattctgagcagcgt
attgttgcttctaaggtcataaagaggtttatccttcatgctaagaaaactgctttcgtg
gttgaacatgattttattatggctacctacttggctgatagagttatagtctatgagggg
aagccgtcaattgattgtactgcaaattgtccccagtcattgttgactgggatgaatctg
ttcttatcgcatcttgatatcacatttagacgtgaccccactaactatcgcccaagaatc
aacaaattggagtcaactaaggatagggaacaaaaagctgctgggtcctactattacctg
gatgattga
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