Malus sylvestris (European crab apple): 126604787
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Entry
126604787 CDS
T09027
Symbol
LOC126604787
Name
(RefSeq) uncharacterized protein LOC126604787
KO
K10756
replication factor C subunit 3/5
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03030
DNA replication
msyl03410
Base excision repair
msyl03420
Nucleotide excision repair
msyl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126604787 (LOC126604787)
03410 Base excision repair
126604787 (LOC126604787)
03420 Nucleotide excision repair
126604787 (LOC126604787)
03430 Mismatch repair
126604787 (LOC126604787)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msyl03032
]
126604787 (LOC126604787)
03036 Chromosome and associated proteins [BR:
msyl03036
]
126604787 (LOC126604787)
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126604787 (LOC126604787)
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
126604787 (LOC126604787)
DNA Replication Termination Factors
ELG1-RFC complex
126604787 (LOC126604787)
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
126604787 (LOC126604787)
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
126604787 (LOC126604787)
Check point factors
HRAD17(Rad24)-RFC complex
126604787 (LOC126604787)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
T2SSE
Microtub_bd
AAA_lid_RFC1
Motif
Other DBs
NCBI-GeneID:
126604787
NCBI-ProteinID:
XP_050128053
LinkDB
All DBs
Position
15:complement(21645610..21649433)
Genome browser
AA seq
750 aa
AA seq
DB search
MENNWSRPSRNSLTPVKQRRSGYEPSYAETDIPDSPWHGGNKWPSGEWESKGAKPELYLG
RTISPSKQSRRSSRFEYDGPTPRTTSVVSPVRRRTSSKSPYKPRRDDSNARTLPMAGSDI
HRNISPLGKSERRRHVSPFQTDREERNMNDDGDEIVGSNRNLLHQRRNSRRSAAAPQHRS
PRETNQQRNCSITPTKGERTPSPLSKSMAHQKQRQVSTPSVGEINEMLAHAKLARTSPNS
MLNNKAAPVYESSDSIAAGDIFFSRECDVMALPRNHLQKPKVVSSAASQQRSTTRSNGNF
DQNVNIRGLLSPYGLSQTTTTTSSSAVSRQSSGKLSMASSKTSDASRTTTASMRKFTDNR
RKSEGQAWFSCMKKSSCKNKKLSPEQSAFNEAAFIEKAFVVESLRQLWADKHRPSSLNGF
ACHKQEAQVLKQLAIDNVSPHILFTGPTGSGKKALTMAYLREIYGDASWEEQRPMQVVVP
LTSSLHHVELNVQLEPNARYALMGLVKEINNNEIAHEVSSINSKANHRVMVLYGVDKASA
HIQHLIKWIMDCHSESWKLILCCENDTGVIESVKNRCMVIKVDAPATHEIMEVLIQIASK
EDFDLPMSFASKIANKSKQNLREAIMGLEACKAHNYPFEDEQPIPLGWEEVLLELASEIL
ADPSPKRLFFIRGKFQKLLIDFVHPKLILLKLVELFLKGVASSSRRELYYWHAYYEKRLP
EGASALLKLEEFVAKFMSIHRKSSNHREYV
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggagaataattggtcaaggcccagtaggaattctctgacgccggtgaagcaaaggagg
agtggatatgagccatcttatgccgagacagacatcccagatagcccctggcacggcgga
aacaaatggccaagtggagaatgggagtctaaaggggcaaaaccagagttgtatttggga
agaacgatcagcccttcgaagcagagcaggagatcttcaaggtttgaatacgacggccct
actccaagaactacctctgtggtaagtccggttcgaagaagaaccagcagcaagtcgccc
tacaagcccagaagagatgacagcaatgctcgaactttgccaatggcgggttctgatatt
cataggaacatcagccccttgggaaagtccgagcgcaggagacacgtttcaccttttcaa
acagaccgagaagagcgcaatatgaacgacgatggtgatgagattgtaggctcaaacaga
aacctgttacatcagcgaaggaacagcagaagatcagcagctgctccgcagcatagatca
ccgagagaaaccaaccagcagaggaattgttcgatcacgcctacgaaaggggagaggact
ccatccccgttatccaaaagcatggctcatcagaagcaaaggcaagtgagcacgccatct
gtcggcgaaattaacgaaatgcttgcccatgcaaagcttgctagaacttctccaaactcc
atgttgaataacaaagctgctccggtttacgaaagctcggattctattgcagcaggtgat
atcttcttctccagagagtgcgatgtcatggcattgcctcgaaatcacttacaaaaaccg
aaagtggtttcctctgctgcctctcaacagagaagtactactcgatcaaacggtaacttc
gatcagaatgtcaatatccgcggacttttgtccccgtatggtctgtcacagacaaccacc
accacctccagctctgcggtgagcaggcagagcagcgggaagctgagcatggctagcagc
aagacgagtgatgcaagcaggacgacaacagccagcatgaggaagttcacagacaatagg
aggaagagcgaaggtcaggcgtggttttcgtgtatgaaaaagagttcttgcaagaacaaa
aaattgtcacctgagcagagcgcattcaatgaagctgcattcatcgagaaagcgttcgtg
gtggaaagtctcaggcagttatgggcggataagcatcggcctagttcgttgaacggattc
gcttgccacaaacaagaagctcaagttctcaagcaacttgcgattgataacgtcagtccc
catattttgtttactggaccaactggttctgggaagaaagctctaacaatggcgtatctt
cgggaaatatacggcgacgcgagctgggaagaacaaaggccaatgcaagtagtggttcca
ttgacatccagtcttcaccatgtagaactcaatgtacaactggaaccaaatgccagatat
gccctaatgggtttagtcaaggaaataaacaacaacgaaattgctcatgaagtcagctct
ataaattccaaggcaaatcatagagtgatggttttgtacggtgttgacaaagcatcagcg
cacattcagcatttgatcaaatggatcatggactgtcactcggaatcgtggaagctcata
ctctgttgcgaaaatgacaccggcgtcattgaatcggtgaaaaaccggtgcatggtcatc
aaggttgatgctcctgcgactcatgaaattatggaagttcttattcagatagccagcaag
gaggactttgacctacctatgagctttgctagtaagattgcaaataaatcaaagcagaat
ctgagagaagcaatcatgggtcttgaagcatgcaaagcacacaactatccttttgaagat
gaacaaccaattccgcttggatgggaagaggtgctgcttgaactcgcttcagaaatccta
gccgatccttcaccgaagagattatttttcatccggggaaagtttcaaaagcttcttata
gattttgtccatccgaagctgattctactgaagctcgtggaactgttcctaaagggagta
gcatctagttctaggagggaactctattactggcatgcttactatgagaaaagactcccc
gaaggggcgagtgcgttactgaaactagaagaatttgtggccaagttcatgagcatacac
cggaagagttccaaccaccgggagtacgtgtag
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