Malus sylvestris (European crab apple): 126604815 Help Entry 126604815         CDS       T09027                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism msyl  Malus sylvestris (European crab apple) Pathway msyl04148   Efferocytosis Brite KEGG Orthology (KO) [BR:msyl00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     126604815  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:msyl04131]     126604815 Membrane trafficking [BR:msyl04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     126604815 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H TPR_MalT TPR_19 Motif Other DBs NCBI-GeneID:  126604815 NCBI-ProteinID:  XP_050128084 LinkDB All DBs Position 15:complement(22026453..22032687) Genome browser AA seq 1004 aa AA seqDB search MVHSAYDSFELIGDCPTKIEAIESYGPKLLLGCSDGSLKIYAPDSSGSDRSPPSDYHAHK LQKEPYALERNVAGFSKKPLVSMEVLESRELLLSLSESIAFHGLPNLGTIAVITKAKGAN VYSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMSWCGENICVGIRREY MILNSTNGALSEVFPSGRIAPPLVVSFPSGELLLGKDNIGVFVDQNGKLCQEGRVCWSDP PNVVVIQKPYAIALLPRYVEVRSLRDPYPLIQTVVLRNARRILQSNNAVIVALENAVYGL FPVPLGAQIVQLTASGDFDEALALCKMLPPEEASLRAAKEASIHMRYAHHLFDNGAYEDA MEHFLASQVDITYVLSLYPSIVLPKTTMVAVPEKLMDISGDSSYLSRGSSGLSDDMEHSL PSVLESEESAALESKKMSHNTLMALIKFLQKKRYGIIEKATAEGTEEVVLDAVGDNFVSY ESRFKKSNKGRGSVPITSGAREMAAILDTVLLQALLLTGQASVALELLKGLNYCEVKICE EILQKNNHYAALLELYRCNSMHHEALKLLHQLVEDSKSNQVQTELIQKLKPESIVEYLKP LCGTDPMLVLEYSMLVLESCPTQTIQLFLNGNIPADLVNSYLKQHAPNLQATYLELMLAM DENGVSGNLQNEMVHIYLSEVLDWYADLSAQQKWDEQTYSSTRKKLLSALESISGYSPEV LLKRLPADALYEERAILLGKMNQHELALSLYVHKLHVPELALSYCDRMYESLVHQPSSRS SGNIYLTLLQIYLNPRKTTKNFEKRITNLVSPQNIGTPKVGSANTVKSKGGRGAKKIAAI EVAPDIRVSQSSTDSSRSDGDAEEYSEEGGSTIMLDEVLDLLSRRWDRINGAQALKLLPR ETKLQHLLPFMGPLLRKSSEAYRNLSVIKSLRQSENLQVKDELYEQRKGVVKITSDSMCS LCRKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKTVGRGSPLWKR NT seq 3015 nt NT seq  +upstreamnt  +downstreamnt atggtacacagtgcctatgattccttcgagctcatcggtgactgcccgacgaagatcgaa gccatcgaatcctacggtccgaagctcctcctcggctgctccgatggatctcttaaaatc tatgctccggactcctccggctccgaccgctctccgccgtctgattaccacgcgcacaag ctccagaaggaaccgtacgcgcttgagaggaacgtcgccggtttctcaaagaagcccttg gtttcaatggaggtcctggaatcccgagagctcctactttccctctcggagtcgattgcg tttcacggcctcccgaacctgggcaccattgccgtgatcacgaaggcgaagggcgccaat gtctactcgtgggacgaccgcagaggattcctctgcttcgcgaggcagaagcgggtctgt attttccggcacgacggtggacgagggtttgtggaagtgaaggaatttggggtcccggat gtggtgaagtcgatgtcatggtgtggagaaaatatatgcgtagggattagaagagagtat atgatactgaattctacaaatggtgcattgtctgaggtgtttccttcggggagaatagca ccgccgctggtggtttcttttccttccggagagcttcttctcggaaaggataacatcggg gtttttgtggaccaaaacgggaagctttgtcaagaaggcagggtttgttggtcggatccc ccgaatgttgttgttattcagaagccatatgcaattgctctattaccaagatatgttgag gttcggtcgctccgggatccctatccattgatacagacggttgttcttagaaatgctcgt cgtattctacagagcaataatgctgtaattgttgcattagagaatgctgtttatggtctc ttccctgttcctcttggtgcccagattgtacaattaacagcatctggtgattttgatgaa gcgttggcattgtgtaagatgcttcctccagaagaagcaagtcttagagctgcaaaggag gcctcaattcatatgagatatgctcatcatctttttgataatggggcctatgaagacgcc atggagcactttttagcatctcaagtagacataacctatgttctttctttgtatccatct attgttcttccgaagacaactatggttgctgtgccagagaagctaatggatatttctggg gattcatcatacctctcaagaggttcgtctggtttatcagatgatatggaacactctctt ccgtctgtactggaatctgaggagagtgcagcactcgagtccaaaaaaatgagccataac actctcatggctctcataaagttcttacagaaaaaaagatatggcataattgaaaaggcc actgctgagggaactgaagaggttgttttagatgctgttggagacaattttgtctcctat gaatctaggtttaagaaatcaaacaaggggcgtggcagtgttccaattacctctggtgct agggagatggctgcaatcctggatacagtactactccaagctctacttcttactggacag gcttcagtggctttggaattactgaaaggtcttaactactgtgaagtaaaaatatgcgag gagatactccagaaaaataatcattacgctgctttgttagaactttacaggtgcaattca atgcaccatgaagctctaaaacttttgcatcaattggtagaagattctaaatctaaccaa gtgcaaactgaactgatccaaaagttaaagcctgagtcaattgttgaatatctcaagcct ctgtgtgggactgatcccatgcttgtcctggagtattcaatgcttgttcttgaaagttgt ccaacacaaacaattcagctctttctgaatgggaatattccagcagacctggtcaactct tacttgaagcagcatgctccaaacttgcaggccacatacttagagcttatgcttgcaatg gatgaaaacggggtctccggaaatctgcaaaatgaaatggtacatatctatctatcagaa gtacttgattggtatgcagatttaagcgctcagcagaaatgggatgagcaaacttactcc tcaacaagaaagaaattattgtctgctttagagagtatctcaggatatagtccggaggtt ttgttgaaacgtcttccagcggatgctttatacgaagagcgtgcaattttgttgggaaaa atgaaccaacatgagcttgccttatctctctatgttcataagcttcatgttcctgagctg gcactgtcctattgtgatcgcatgtatgagtccttagttcatcaaccatcttcaagatct tccggcaatatatacctaactctattacaaatttatcttaatccgaggaaaacaaccaag aactttgagaagcgaattacaaatttagtatcacctcagaatatcggtacaccaaaggtt ggttctgcaaatacagttaaaagtaaaggaggtcgtggtgctaaaaaaattgctgcaata gaggtggcacctgacataagagtcagtcaaagtagcactgacagtagcaggagtgatgga gatgcagaggaatatagcgaggaaggagggtcaacaatcatgcttgatgaggtcctcgat ttgttgagccgaaggtgggacagaattaatggagctcaggcacttaaacttttgccaagg gaaactaagctacagcacttgcttccatttatgggacctctgttgagaaaatccagtgaa gcgtacaggaacctttcggtgatcaagagtttgaggcaaagtgagaacctgcaggttaaa gatgaactctatgaacaaaggaaaggggtggtgaagatcaccagtgatagcatgtgctcc ctttgcaggaagaaaataggaacaagtgtctttgccgtgtatccaaacgggaaaacacta gtgcactttgtgtgctttagagactcgcaaagtatgaaaaccgtgggcagaggatcgccg ctatggaagcgatga

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