Malus sylvestris (European crab apple): 126604846
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Entry
126604846 CDS
T09027
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126604846
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126604846
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126604846
Peptidases and inhibitors [BR:
msyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126604846
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126604846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
zf-HIT
Motif
Other DBs
NCBI-GeneID:
126604846
NCBI-ProteinID:
XP_050128118
LinkDB
All DBs
Position
15:3155403..3160640
Genome browser
AA seq
716 aa
AA seq
DB search
MHVAGVSLDLNWFLHFIFTVFIIAFCLLHLVKNTASKYFEVDASFEGGGDGGDQTPIPGA
LMEDPVCVVCGNSGSRRCSRCKAVRYCSSKCQEKHWKSGHKTECKDFQPSGRVNSAQNTL
TNRRFKTSGVGGKTFPGLALVPAHGISKRIKKPKEILFPYDEFVELFNWDKPGFPPCGLL
NCGNSCFANVVLQCLSSTRPLVAYLLEKGHQRECIREDWCFLCEFQIHLQRASQSSQSFS
PTNIISRLPNIGGNLGYGRQEDAHELMRFAIDTMQSVCLDEFGGEKAVTPSSQETTLIQH
IFGGQLQSQVICTKCENISNQYENMMDLTVEIHGDASSLEECLDQFTIKEWLHGDNMYKC
DGCNDYVKAWKRLTVKRAPNILTIALKRFQSGRFGKINKRVTFPETLDLNPYMSEVGDGT
NIYKLYAVVVHIDMLNASYFGHYICYTKDFSGNWYKIDDCKVGTVNLEEVLSQGAYMLLY
SRVQPRASCLRTEPPKKKEEMMNGEVEPCQKKQHKCSVAESADPTHNSGSVPSDTSLPPQ
IPSCVTDSAAVINGEVAIEHSDNADLKLKLLPTVSKEVCMVENGTVNSPSSPSVSREISI
CEKDPAGELDLDTVRGDSTPAPAGIDLSNGESCWPVLDDVSARCVKDLSSSGREAENGDS
QDMDIGHCESSSSPAEDIEIYRSNGPTTRANGTDYPVVNSGILNGNGIHIIEVDDG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcgcgggagtgagcttggatctgaattggttcctgcacttcatatttacggtg
tttataatcgccttctgtttgctgcacctggtgaagaacacggcctcgaagtactttgag
gtcgacgccagcttcgagggaggaggtgacggtggtgatcagaccccaattcctggcgcg
ctcatggaggatccggtttgtgtcgtctgtgggaattcgggttccaggaggtgctctcgc
tgcaaggccgttagatactgctcatcgaaatgccaagaaaagcattggaagtcagggcat
aagactgaatgcaaggactttcaaccatctggcagagtgaattcagctcagaacacattg
actaatcggagatttaaaacttctggtgttgggggcaaaacattccctggacttgctctt
gttcctgctcatggaatttctaagcgtatcaagaagccgaaagagattctttttccctac
gatgaatttgttgaacttttcaattgggacaagccagggtttcctccttgtggactctta
aattgtggaaacagttgctttgccaatgtggttctacagtgtctttcatccactcgaccg
cttgttgcctacttgttagagaagggccatcagagagagtgcatacgtgaagactggtgc
ttcctttgtgaattccaaatccatcttcaaagagcaagccaaagttcgcagtccttttca
ccaaccaacattatctctagattaccaaatattggtggtaatcttggctatgggaggcag
gaggatgctcatgaactcatgaggtttgccattgatacaatgcagtctgtctgtcttgac
gagtttggtggagagaaagctgtgactccaagctctcaagagacaacgttaattcaacat
atatttggtggccagctacaatctcaggtgatttgtacaaaatgcgagaatatatcaaat
caatacgaaaatatgatggatttaactgttgagattcatggggatgcttcatcattggag
gagtgtcttgatcaattcaccatcaaggagtggcttcatggcgataatatgtataaatgc
gatgggtgcaatgactatgtcaaggcttggaaacgtcttactgttaaacgggctccaaac
atactcacaattgccttgaagagatttcagagtgggcggtttgggaaaattaacaagaga
gtaacatttcctgaaacattagatcttaacccctacatgagtgaagtgggagacggtaca
aatatctataagctttatgccgttgtggtccatatcgatatgctaaatgcttcatatttt
ggacactatatctgttataccaaggatttcagcggaaactggtacaaaatcgacgactgt
aaggttgggactgtaaatttggaagaggtactttcccagggagcatatatgctattatat
agcagggtgcagccacgagcatcatgcctaaggaccgaacctccaaagaaaaaggaggaa
atgatgaatggcgaagtagagccttgccaaaagaaacaacataaatgttccgtcgctgag
tctgcagatcctacacacaattctgggtctgtgccatctgacacaagtttgccaccacag
attccaagctgtgtaacagactcggctgctgtaatcaacggtgaggttgcaattgaacat
tctgataatgcggatctcaagcttaaattacttccaactgtttcaaaagaggtttgcatg
gttgaaaatggtactgttaattccccatctagtccatctgtttcaagggagatttctatc
tgcgagaaggaccctgctggtgaattggatttggatactgtaagaggtgattcaactcca
gctccagctggtatcgatttgtctaatggtgagtcatgttggcctgttctggacgatgta
tcagcgcgctgcgtgaaggatctctcttcttcaggtcgtgaagctgaaaatggcgattcc
caagatatggatatcggtcattgtgagtcaagttcatcccctgcagaggacattgaaatt
taccggagcaatgggccgacgactcgtgcaaatggaactgattacccggttgtgaattct
ggtattctgaatgggaacggaatccacataatagaagtagatgacggctaa
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