Malus sylvestris (European crab apple): 126605096
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Entry
126605096 CDS
T09027
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03082
ATP-dependent chromatin remodeling
msyl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126605096
03083 Polycomb repressive complex
126605096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126605096
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
126605096
Histone modification proteins
HAT complexes
HATB complex
126605096
HDAC complexes
Sin3A-HDAC complex
126605096
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
126605096
PRC2.2
126605096
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
126605096
Heterochromatin formation proteins
Other heterochromatin formation proteins
126605096
Chromatin remodeling factors
NuRD complex
126605096
NuRF complex
126605096
NuRF complex (fruit fly)
126605096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
eIF2A
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
126605096
NCBI-ProteinID:
XP_050128406
LinkDB
All DBs
Position
15:complement(16311636..16317247)
Genome browser
AA seq
498 aa
AA seq
DB search
MDAQSQQQAGPVKKKETRGRKPKPKEEKKDDHQQQAKLKKSQQNATVDDKYTQWKSLVPI
LYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRV
AAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQ
PNRHAVLGATTSRPDLILTGHQDNAEFALALCPTEPYVLSGGKDKTVVLWSIQDHIAAST
TDPAATKSPGSIIKNSKSGDGNDKATDGPTVAPRGIYYGHEDTVEDVAFCPSSSQEFCSV
GDDSCLILWDARVGSSPAVKVEKAHDADVHCVDWNPLNDNLILTGSADNSVRLFDRRNLT
SEGVGAPIYKFEGHKAAVLCVQWCPDKSSVFGSSAEDGLLNIWDYEKVSKKERTPKGPTS
PPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEV
LAELEKFKSHVVSCSSKP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcagtcgcagcagcaagctggaccggtgaagaagaaggagactcggggccgg
aagcccaagcccaaggaagagaagaaagacgaccaccaacagcaagccaagctgaagaag
tcgcagcagaacgccaccgtcgacgacaagtacactcagtggaagtccctcgtcccgatc
ctctacgactggctcgccaaccacaatctcgtctggccctccctctcttgccggtgggga
cctcagctcgagcaagctacttacaagaatcgccagcgtctctacctttccgagcagact
gatggcagtgttccaaatactctggttattgcaaactgtgaggttgtcaagccgagagtt
gccgctgcagagcatatatctcagttcaatgaggaagcccgctcaccatttgtgaagaag
tacaagaccatcatacatcctggagaggtaaacagaatcagagaacttccacagaacact
aagatagtggccacacataccgacagtcctgatgttctaatttgggatgttgaagctcaa
cctaaccgtcatgctgtccttggagctacaacctcgcgtccagatttgattttgactgga
catcaagataatgctgaatttgctcttgcattgtgtccaactgagccctacgtgctctct
ggagggaaggacaaaacagtggttttgtggagtattcaggaccatatagcagcctctacc
actgatccagctgcaaccaagtctccaggatcaatcattaaaaactcaaagtctggggat
ggtaatgataaagctactgatggccctactgttgcacctcggggaatctactatgggcat
gaggacacagttgaagatgtagcattttgcccttcaagttcacaggagttctgtagtgtt
ggcgacgattcctgcctcatattatgggatgcgcgtgttggctctagccctgctgtaaag
gttgaaaaagctcatgatgctgatgttcactgtgttgattggaatccccttaatgataac
cttattttaacagggtcagcagataattctgttcgcttgtttgatcgccggaatctcact
tctgaaggagttggggcacctatatataaatttgagggtcataaagcagctgttctttgt
gttcagtggtgtccagacaaatcgtctgtctttggaagttctgcagaggatggtctttta
aacatttgggattatgagaaggtcagtaagaaggagcgaactccaaaaggcccaacttca
ccacctggtctgtttttccagcatgctgggcacagggacaaagttgttgatttccattgg
aatgcatctgatccgtggactgttgtcagtgtgtctgatgactgtgaaagtactggcgga
gggggcacattgcagatatggagaatgagtgatctgatctacaggcccgaagaggaggtt
ctggcagagcttgagaagttcaagtcccatgttgtttcctgttcttcaaagccttga
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