Malus sylvestris (European crab apple): 126605129
Help
Entry
126605129 CDS
T09027
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Module
msyl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126605129
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
126605129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
126605129
NCBI-ProteinID:
XP_050128455
LinkDB
All DBs
Position
15:complement(10560673..10563100)
Genome browser
AA seq
405 aa
AA seq
DB search
MAYTSSFCGNIHNYYVAAVMLFFTISILFLQSSNAAAVSYNVMKFGARADGKTDSTQAFV
KAWASACSSGQGNAVMYIPKGRFLLKAVVFRGPCKTRQVTVRIDGTLVAPTDYRALGNSG
YWILFIEVTGLRVLGGSLDARGVAFWACRKSGKSCPVGARSITFNWANNVLVSGLTSINS
QATHLVVNSCNNVVVRNVKIIAPSESPNTDGIHVQSSTGVTITGSILQTGDDCISIGPGT
RNLYMSNIKCGPGHGVSIGSLGKDLKEDGVQNVTLTNAVFSGSDNGVRIKSWARPSTGFV
KNILFQNIIMRNVKNPVIIDQDYCPNNQGCPSMSSGVKISQVTYRNIQGTSGTAEAVTFE
CSPSTPCTGIRLQDIKLTYLNKATTSSCKNISGTSTGLLMPDSCI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcttatacatcaagcttctgtggcaacattcataattattatgtagcagcagtaatg
ctgtttttcacaatcagcatattgttcttgcagtcttccaatgcagcggcagttagctac
aatgtgatgaagtttggtgcacgagcagatgggaagacggactcgacccaagcattcgtc
aaggcatgggcatcggcgtgcagctccgggcagggcaatgctgtcatgtacatccccaaa
ggaaggttcttgttgaaggctgtggtgtttagaggtccatgcaagaccagacaagtaaca
gttcgaatagacggaacccttgtggcccccacggactatagggctttgggaaactcaggc
tactggattttattcattgaggtcaccggacttagggtcctcggtggttccctcgacgcc
agaggggttgcattttgggcttgcaggaaatccggcaagagttgccctgttggagctagg
tctataacgttcaattgggcaaacaacgttctggtaagtggtttaacatcgatcaacagt
caggcaacccaccttgtagtcaacagctgcaacaatgtggtcgttcgaaacgtgaagatc
atcgctccgagtgaaagcccaaacacagatggcattcatgtgcagagctctaccggagtc
accatcacgggcagcatcttgcaaaccggagacgattgcatatcaatcggtcctggcacc
agaaacctctatatgagcaacatcaagtgtggtccaggccatggcgtaagcattggaagt
ctaggcaaggatctcaaggaagatggtgtccaaaatgtaaccctaacgaatgcagtgttc
agtggatcagacaatggagtacgaataaagtcatgggccaggcctagcactggcttcgtt
aagaacattctcttccaaaacatcatcatgaggaacgttaaaaaccccgtcatcattgac
caggattattgccccaataaccaaggctgtccttctatgagttcgggtgtgaagattagt
caagtgacatacagaaacatacaagggacgtcgggaacggcagaggcagtaacatttgaa
tgcagccctagcactccatgtacagggattagattgcaagacatcaagcttacatatctg
aataaggctaccacgtcatcgtgcaagaacattagtggaaccagcactggactgcttatg
ccagattcttgtatatag
DBGET
integrated database retrieval system