KEGG   Malus sylvestris (European crab apple): 126605219
Entry
126605219         CDS       T09027                                 
Name
(RefSeq) uncharacterized protein LOC126605219
  KO
K03873  elongin-B
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    126605219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msyl04121]
    126605219
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126605219
Ubiquitin system [BR:msyl04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     126605219
   Cul5 complex
     126605219
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     126605219
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N Rad60-SLD_2 Ubiquitin_5
Other DBs
NCBI-GeneID: 126605219
NCBI-ProteinID: XP_050128546
LinkDB
Position
15:10931009..10933788
AA seq 103 aa
MAMYIRVKRSKTTYFIQCEPTETSLDIKQKLHDLTDQPVNDQRVILVSTGEVLEDSKTLA
DQKVENDAVVALAFRKDDNEFEEVNIVRPDDFYQSRDADAGNW
NT seq 312 nt   +upstreamnt  +downstreamnt
atggccatgtatatccgtgttaagcgtagtaagacaacttactttatccagtgtgaacca
actgagacaagtttagatattaagcagaaattgcatgatcttactgatcaaccggtcaat
gatcagcgcgtgatcttagtcagtaccggggaagtattggaggattcaaagacgttggca
gatcagaaggttgaaaatgatgccgttgttgcattggccttcagaaaagatgacaatgag
tttgaagaggtcaacattgtacgaccagacgacttctatcagtctcgtgatgcagatgca
ggcaattggtga

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