Malus sylvestris (European crab apple): 126605675
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Entry
126605675 CDS
T09027
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126605675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126605675
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
126605675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_25
AAA
AAA_22
AAA_33
RsgA_GTPase
AAA_30
AAA_18
nSTAND3
AAA_28
Rad17
AAA_23
Zeta_toxin
ABC2_membrane_3
RuvB_N
NTPase_1
AAA_11
cobW
NACHT
ABC_ATPase
T2SSE
TIP49
AAA_19
AAA_5
AAA_17
Motif
Other DBs
NCBI-GeneID:
126605675
NCBI-ProteinID:
XP_050129048
LinkDB
All DBs
Position
15:complement(8233023..8241415)
Genome browser
AA seq
1448 aa
AA seq
DB search
MSNPGSGRSSFDMWRNTSMEVFSMSSRHEEDDEESLTWAAIERLPTYLRTRRGLLAEEEG
KAREIDVTNLGLLERKNLLERLIKIAEEDNEKFLLKLKDRMNRVGLEYPTTEVRFEHLNV
EAEAYVGGRALPTMFNFSINMLELFLNYLHILPSRKQQLPILNDVSGIIKPKRMTLLLGP
PGSGKTTLLLALAGKLGKDLKLSGRVTYNGHGMEEFIPERTSAYISQHDLHIPELTVRET
MAFSARCQGVGPRYEMLVELSRREKAANIKPDPDLDVYMKAAALEGQETNVVTDYIIKVL
GLDICADTLVGDHMRRGVSGGQRKRLTTGEMLVGPAKALFMDEISTGLDSSTTYHIVNSL
RQSIHILNGTALISLLQPAPETYDLFDDIILLSDGHIVYQGPRENVLEFFGQMGFKCPER
KGVADFLQEVTSRKDQEQYWAHKEKPYSFVTSDEFAEALQSFHIGRELGDELAIPFDKSK
GNPASLTTKKYGVGKKELYKACMSRQILLMKRNSFIYIFKMIQFSLMALVTMTLFLRTEM
HRGSVEDGGIYMGSLFFTIVIIMFSGYSELAMTVMRLPVFFKQRDLLFFPAWAYALPNCL
IRIPLTIVEVSIWVTVTYYVIGYDPNIGRFFKQFLSLLCISQMANGLFRLIAAIGRSPIV
ANTFGSAALLVVFVLGGFILSRDSMKKWLLWGYWLSPMAYGMNALAVNEFLGKSWRHVPA
NSTEPLGVLVMKSRGVLPEARWYWLGVVALLGFILLFNFLFTLALQYLDRKYQLRHFSSH
HWRCSNNHTKFSVAIDKPQAVMSKEALAKKLAKKTGDTTELSLTRNESQENMSANRTRKR
GMVLPFEPLSITFNEIRYAVDMPQEMKAEGITENRLELLKGVSGAFRPGVLTALMGVSGA
GKTTLMDVLAGRKTGGYIEGNITISGYPKNQETFARISGYCEQTDIHSPHVTVYEALIYS
AWLRLPPEVDSPTRKMFIEEVMELVELTSIREALVGLPGVNGLSTEQRKRLTIAVELVAN
PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELFLLKRGG
EEIYVGPLGHHSSDLINYFEGISGVSKLRDSHNPATWMLEVTSAGQEEALGVSFSDIYKN
SELHRRNKVLIKELSTPPPNSRDLHFSTQYSQSFFNQCIACLWKQHWSYWRNPSYSAVRL
LYTAMMALVFGTIFWGLGSKRNNQQDVLNAMGSMYSAVLFIGIQNASSVQPVVGIERIVF
YRERAAGMYSAFPYALGQIIIELPYTLFQTIIYGLIVYTMIGFDWTVGKFLWYLFFMYFT
FLYYTLYGMMIVGITPNTTIAAVASSAVYPLWNVFSGFIIPRTRIPIWWRWFYWVCPVSW
TLYGLLTSQFGGIKDTLDSGETVEDFMKDYFGYREGFLGVVAIVHVGISVLFGFIFAFSI
KALNFQKR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcctgggagtggacgtagcagctttgacatgtggagaaacacttccatggaa
gttttctccatgtcttctcgtcacgaagaagatgatgaagagtctctgacatgggctgct
atcgagagactgcctacgtatttacgcacgcggagaggtctgcttgcggaagaggagggc
aaagctagagagattgatgtgacgaacctgggattactagaaaggaagaacttgttggag
agactgattaagattgcagaggaagataatgagaagttcttgttgaagctcaaggatcgc
atgaacagagttggacttgaatatccgacaactgaagtccggttcgagcatttaaatgtt
gaagcagaggcttatgttggcggtagggcattgcctacaatgttcaacttttccattaat
atgttagagttgttcttgaattatctccatattcttccaagtcgaaagcaacaattacca
atcctcaatgatgttagtggaattatcaagccaaaaagaatgacactgcttttaggcccc
ccgggctctggaaagaccacattactattggcactggccggaaaacttggtaaagatcta
aaactttcggggagagttacatacaacggacacgggatggaagagtttataccagagaga
acatcagcttatataagtcaacatgatctacacataccggaattgacagtgagagaaacg
atggctttttcagcaagatgtcaaggggtcgggccacgttatgaaatgctggtagaatta
tcaaggagagagaaggccgcaaacattaagccggatcctgatcttgatgtttacatgaag
gcagcagcactggaaggacaggaaaccaatgtagttacagattacataatcaaggttctg
gggctcgacatttgtgctgacaccctggtaggggatcacatgagacgaggtgtctctggt
ggacaaagaaagagactcaccacaggggagatgctggtcggaccagcaaaagcacttttc
atggatgaaatatctaccggcttggacagttcgactacatatcacatagtaaattcactc
agacaatccatccacatcctcaatggaactgctctaatctctctcttgcagccagcacca
gaaacttatgatctctttgatgacataattctcctctcagatggccacattgtgtatcaa
ggccctcgtgagaatgtgcttgaattcttcggacaaatgggattcaaatgtccagagagg
aaaggagttgctgatttcctacaagaagtaacatcaaggaaagatcaagagcaatactgg
gctcataaagagaagccttatagctttgtaacttccgatgaatttgctgaagcattgcag
tcatttcacatcggtagagaacttggcgatgagcttgccattccgtttgacaagtctaaa
ggcaaccctgcatctttaacaactaagaagtatggagttggcaagaaggaactttacaaa
gcttgtatgtctagacaaattttgcttatgaagaggaattcgtttatctacattttcaaa
atgatccagtttagtttaatggctttggtaacaatgacattattcttacggactgagatg
caccgaggtagtgtggaagatggtgggatttacatgggatctttgtttttcacaattgtg
atcattatgttcagtgggtactcggaacttgctatgactgtaatgagacttcctgtgttt
ttcaagcaaagggatcttctgttctttcctgcttgggcgtatgctttaccgaattgtctg
ataaggatccctttgaccattgtggaggtttctatttgggtgaccgttacttactacgtt
ataggttatgatccgaacattggaaggttcttcaaacagttcctttcactgctgtgtatt
agccagatggcaaatggactgttccgattgatagcggcaataggcaggagcccaattgtt
gcaaacacatttgggtctgctgctttacttgttgttttcgttctaggtggctttatctta
tctcgagacagtatgaagaaatggttgctgtgggggtattggctctcaccgatggcatat
ggaatgaatgccttggccgtcaacgaatttcttggaaaaagttggagacatgttcctgcc
aactccacagaaccattaggagttctggtcatgaagtctcgaggggtactaccagaagcg
cgctggtactggcttggagtagtagctttacttggatttattcttttattcaacttcctt
ttcaccttggcacttcagtatcttgatcgtaagtaccaacttagacatttttcttctcat
cattggagatgttctaacaatcacactaaattttctgtagccattgacaagcctcaggca
gtaatgtccaaagaagccttggcaaagaaacttgccaagaaaactggagacaccaccgag
ctttcattaacaagaaatgaaagtcaagagaatatgtctgccaatcgtaccaggaagcga
ggaatggttcttccatttgaacccctctcaattacatttaatgaaatcagatatgcagtt
gacatgccacaggaaatgaaagctgaaggcataactgagaatcgactagaacttctgaag
ggtgtgagtggtgcctttcggcctggtgtcctaacagccctaatgggtgttagtggcgca
ggaaagactactctaatggatgtcttggccggaaggaaaacaggtggatatatcgaggga
aacatcaccatatctggatatccaaaaaatcaagaaacatttgctcgcatatccggatat
tgtgaacaaacagatatacactctcctcatgtcacggtttatgaggctttgatttattca
gcatggctccggttaccaccagaggttgattccccaaccagaaagatgttcatcgaggaa
gttatggagcttgtggaactgacctcaataagggaagcacttgttggattgcccggagtg
aatggtctttcaactgagcagcgtaaaaggctaacaattgcagtagagcttgttgccaac
ccctccataatattcatggatgagccaacctctggccttgatgccagggcagcagcaatt
gtaatgagaacagtgaggaatacggtggacactgggcgaactgtagtctgcaccattcac
cagccaagcattgacatatttgatgctttcgatgagctgtttcttttgaaacgaggaggc
gaggaaatatatgttgggcctttaggccaccattcttcggacttgatcaactattttgag
ggaattagtggagtttctaaattacgggacagtcacaatcctgcaacttggatgctggag
gttacttctgcaggacaagaagaggctctcggggttagtttcagtgacatatataagaac
tcggaactacacaggagaaataaggtcttgatcaaggaactaagtactccaccaccaaat
tcaagagatttgcacttttctacacagtattctcagtctttcttcaaccagtgtatagct
tgcctatggaaacagcattggtcttactggcgaaacccatcatacagtgcagtgagactt
ttgtacactgctatgatggctttagtatttgggacaatattctggggtcttggttccaaa
aggaataaccaacaagatgttcttaatgcaatgggttctatgtattctgctgttctcttc
attgggatacaaaatgcctcatcagtgcagccagttgtaggtattgaaaggatagtattt
tacagagaaagggctgctggaatgtactcagcttttccatatgccttgggacagataatc
attgagcttccatatactttgttccaaactatcatctatgggcttatagtatacaccatg
atcggattcgattggacggtcggcaagttcctttggtatctcttcttcatgtacttcacc
ttcttatactacacattgtatggtatgatgattgtgggcattactcccaacacaaccatt
gctgctgtagcttcctcagccgtctaccccttatggaatgttttttccggattcatcatt
ccaagaacaagaattccgatatggtggagatggttctactgggtgtgtccggtgtcttgg
actttgtacggattgcttacttcacaatttggaggcatcaaggatacgcttgattcgggt
gaaactgttgaagattttatgaaggattattttggctacagagaaggctttctaggtgtt
gttgcaattgtccatgttgggatttcagtgctcttcggattcatctttgccttttcaatc
aaggcattgaacttccagaagagatga
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integrated database retrieval system
