Malus sylvestris (European crab apple): 126605833
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Entry
126605833 CDS
T09027
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126605833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126605833
03036 Chromosome and associated proteins [BR:
msyl03036
]
126605833
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126605833
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126605833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
126605833
NCBI-ProteinID:
XP_050129239
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All DBs
Position
15:6562245..6567893
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AA seq
724 aa
AA seq
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MPGVAYDSGDTPGALGSNDTAMVPYSPEIRQPVVYSLHHGLNPPIARLSISWSRGNTLRV
SVLRPPSGEDSEKDEVGGKVVEVRLSNGDGENGDANWRRIAYGSVPPFALLQSRRSSVAS
LSKVSMGPSLYNIDWWEYVMEYSKDINSLLGSSKSLPNPVIEDPKMVLRKVEEPTALKAA
WELMEIFYADKQSQPWLPERLVDWLADHDSLLSSTQPTVHSKLVDFQNELVRLQVIEDDP
KYWEVLSSALSVGWIEIVVKMLRLHGSYQLHQLGNRETENGLVETVSVLISKMPRMRPEV
EDGKLGECFKAKPDFIKAWEKWRAQITKLDCSAYWRQCDHRQTREGLKNMIQIMLGNTDN
LCNVTCHWIELFVSHFLYVRPFTVGLESMHSLAQKCMQLKPMSSSHGLIAILLGILGENT
EVVLAECSRAFGPWMVAHAIELLTTGSDEAELLLQEERDSLGGISIAELHRLVYAQVLSS
HPLTWQIAPIYLTSCTKQGMALLEILLYKLPIQHNETLLKNIEICRLYELDTVSSNIMKI
AGVYHWKHGRKGAGVFWLQQARDEVRLSRIAQQLFDSVGKSISDESFKQWEGLIELLGSE
SKATGGLDFLHKYRDFKKSLKQVYDGKTTDAARQAVESLISLMKNPSTPQRFWLPLLHDS
LKLLNWPDRPLLDVSQTTLLLNKLQELSMAKLRPDFIEADLPPQALVSVRLALAANLGRA
TLEE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgtcgcctatgactccggcgacacgcccggcgcattaggctccaatgacacc
gctatggtcccatactcgccggagatccggcaacccgtcgtgtactcacttcaccacggc
ctcaaccctccgatcgctcgcctctccatctcgtggtcccggggcaacactctgcgtgtg
tcagttctccgtccgccttccggcgaagactccgaaaaggatgaagttggcgggaaagtg
gtggaggtgaggcttagtaatggagacggcgaaaatggcgatgcgaactggcggaggatc
gcttacggttctgtgccgccgttcgccctactacagagccggaggagctcggttgcgagc
ttatcgaaggtgtcaatgggtccgtcgttgtacaacattgattggtgggagtatgtgatg
gagtatagcaaggacataaattcacttcttggtagctctaagtcgcttcctaatccagtg
atcgaagacccgaaaatggttttaaggaaagttgaggagcctactgctttaaaagctgcg
tgggagttgatggagatattttatgcagacaaacaatctcaaccatggttacccgaacgg
cttgttgattggctggcggatcacgatagtctactttccagcacacagccaacagtccat
tcgaagcttgtggattttcaaaatgaacttgttaggttacaggttattgaggacgatcct
aaatattgggaagtattatcatcggcattgtcagttggctggattgagattgtggtgaaa
atgttgcggttacatggatcttatcaactccatcagcttggaaaccgtgagacagagaat
ggacttgtagagacagtttccgtccttatttcaaagatgccacgcatgcgtcctgaagta
gaagatggaaagttaggtgaatgcttcaaagcaaagccagattttatcaaggcatgggag
aaatggagagcgcaaattactaaacttgactgcagtgcgtactggcgtcagtgtgatcac
cgtcaaacccgggaggggttgaaaaatatgatacaaattatgcttggaaacactgacaat
ctctgcaacgtaacttgccattggatagagctgtttgtttctcactttctatatgtcaga
ccattcacagtgggtcttgaaagcatgcatagcctagcccagaagtgcatgcagttaaaa
ccaatgtctagttcccatgggttgatagcaattcttcttggaatcctaggggaaaatacc
gaggttgtcctagcagaatgctcaagagcatttgggccttggatggttgcccatgccatt
gagttgttgaccactgggagcgatgaagcagaacttcttctacaggaagaacgcgatagc
ttggggggaattagtatagcagaattacatcgacttgtctatgctcaagtcctatcgtca
catccattgacttggcaaattgctccaatttacttgacatcttgcacgaagcagggaatg
gctttgttagagattctattgtataagctgccaattcaacataatgaaacgctacttaag
aatatagagatatgccgtctttatgaacttgacactgttagttcaaacattatgaagatt
gctggggtgtaccattggaagcatggtaggaaaggtgctggagttttttggcttcaacaa
gcccgagatgaagttcgtcttagcaggattgctcagcaattgtttgattctgttggaaag
tcgatatctgatgaaagtttcaagcaatgggaaggcttgattgaattgttgggttctgaa
tccaaggctacagggggtctcgactttctgcacaagtatagggatttcaaaaagtccctt
aagcaagtttatgatggaaaaactactgatgctgctcggcaagctgtagaatctttgata
tcgcttatgaaaaacccatctacgccccagcgcttttggctgcctcttctgcatgactcg
ttaaagctgcttaactggccggaccgtcctctgctagatgtgtctcagacaaccctcctg
ttgaataaactgcaagagttgtccatggctaagctccgtcctgactttatcgaggcagac
ttaccaccgcaagccctcgtttctgtacggttagctcttgctgcaaatctcggccgtgcc
accttagaggagtaa
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