Malus sylvestris (European crab apple): 126606424
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Entry
126606424 CDS
T09027
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like isoform X1
KO
K12819
pre-mRNA-processing factor SLU7
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126606424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126606424
Spliceosome [BR:
msyl03041
]
Complex C
Other components
Step II factors
126606424
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Gene cluster
GFIT
Motif
Pfam:
Slu7
Tudor_3
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
126606424
NCBI-ProteinID:
XP_050129766
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All DBs
Position
16:20467467..20472500
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AA seq
524 aa
AA seq
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MATASAAFKSREDHRKQMELEEARKAGLAPAEVDEDGKEINPHIPQYMSYAPWYLKANQR
SLKHQRKWKSDPNYTKSWYDRGAKTFQADKYRKGACENCGAITHTTKLCMERPRKKGARW
TNMHIAPDEKIESFELDYDGKRDRWNGFDAATYAHIIERYEARDEARRKYLKEQQIKKLE
EKNNKQNGEGEISEDDDDDDALKVDEAKVDESKQMDFARVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNDKFYGGDNKYRVSGQALEFKQLNI
HAWEALEKGQDIHMQAAPSQAELLYKNFKVIKEKYGNAATEEQLPKELLLGQSENQVEYN
RAGRVVRGMETSLPKSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTIRNSYCTGVAGV
EAAVATADLMNANIARKVASEEKPAPTEEKRVATWGTDIPDDLVLDQKKLDDALKKEDER
KTEEKDERKRKYNVKWDDKVTPEEMEAYRMKKIHHDDPMKDFLH
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagcggctttcaaatcaagggaggatcatcggaagcagatggaattg
gaggaagcgcgtaaagctgggctagcgccagctgaagttgatgaggatgggaaagagatt
aatcctcatattcctcaatatatgtcatatgcaccttggtatcttaaggctaatcaacga
agtttgaaacatcaaaggaaatggaaatcagatccaaattatacaaaatcctggtacgac
agaggtgcaaagacttttcaggctgataagtaccggaagggagcatgtgaaaactgtggg
gcgatcacgcataccacaaagttgtgcatggagaggcctagaaaaaaaggagcaagatgg
acaaacatgcacattgcacctgatgaaaaaatagagagttttgagctggattatgatgga
aaacgggatagatggaatggttttgatgcagcaacttatgctcatatcattgagagatac
gaggcaagggatgaggctagaaggaaatacctgaaggaacagcagataaaaaagttggag
gagaaaaataataagcagaatggggaaggggagattagtgaagatgatgacgatgatgat
gctctgaaggtagatgaggccaaggttgacgaaagcaaacagatggattttgcaagggtt
gagaagcgtgttcgcacgactggtggtggaagcactggaactgtcagaaatttgcgcatt
cgggaggacacagctaaatatcttttgaatcttgatgtcaattctgcttattatgatccc
aaaactcggtccatgcgtgaagatcctcttcctgatgctgacccgaatgataagttttat
ggaggagataacaaatatagagtgagtgggcaagctctagagttcaagcagctcaatatt
catgcatgggaggcattggaaaaagggcaagacattcacatgcaagctgctccatctcaa
gcagaattactgtataagaactttaaggtcattaaggagaagtatggcaatgctgcaact
gaagaacaacttccgaaggagcttcttttgggacagtctgagaaccaagttgaatataat
cgtgctggcagagttgtaaggggcatggagacatcccttccaaagagtaaatatgaagag
gatgtttacatcaataaccacacaagtgtttggggatcatggtggaaggatcaccaatgg
ggatacaagtgttgtaagcaaacaattcggaacagttattgcactggtgtagctggagtt
gaggctgccgtggcaactgcagacctaatgaatgcgaacattgcccgcaaagtagcctct
gaagagaagcctgctccaacagaagaaaagagggttgctacctggggaactgatataccc
gacgacttggtccttgaccagaaaaaacttgatgatgctcttaagaaggaggatgagaga
aagacggaagaaaaggatgaaagaaagcgcaaatacaatgttaaatgggacgataaggtt
actcccgaggagatggaggcgtatcgaatgaaaaagattcatcatgacgatcccatgaaa
gatttcctgcactaa
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