Malus sylvestris (European crab apple): 126606440
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Entry
126606440 CDS
T09027
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126606440
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126606440
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126606440
04121 Ubiquitin system [BR:
msyl04121
]
126606440
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126606440
Peptidases and inhibitors [BR:
msyl01002
]
Metallo peptidases
Family M67
126606440
Membrane trafficking [BR:
msyl04131
]
Endosome - Lysosome transport
Others
Others
126606440
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
126606440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
126606440
NCBI-ProteinID:
XP_050129792
LinkDB
All DBs
Position
16:11882716..11886963
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AA seq
511 aa
AA seq
DB search
MKISINSMARRVEVDNRYPLRFYFRIADNLLRQASIYREEKNILDLYVILIRFSSLVSET
IPCHRDYQTYPSKEKTLYRKKLLKVLDELESLKPEAQRLVSKLNEAQAVAQLPQLESLEG
TSNGLATSSLEWPSVNNKSLSLSVRQPGSLTSQSSWKYRNDYSQISTNTTQIDKQFQKLS
FNLPLPNKETLSRHSFLGPNGLQGQWRGPSGKVKVQYPTSTDLIPTDNSDLNQAVPNDIV
AVQDGDPGGIKSTMESVLSLDDGAWPCSSQESSPSLINGAREDPFELVIRQPSPPPVLAR
VQQEYAPIPPSKVADPRPGLAKPSLDGMPSSNSYQHLHVPVKLMDDFLRLARANTEKNLE
TCGILAGALKNKVFHITTLIVPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPSQ
TCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTSSPHGIFHLSDPDGVSVIRNCDQRGFHP
HEEPSDGNPIYEHCSHVFINSNLRINVVDLR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcagcatcaattcgatggctcggcgagtcgaggtcgataatcgctatcctctc
cgattttacttccgaatcgccgataatcttctccgacaggctagtatttaccgggaggag
aaaaacatcctagatttgtacgtcatactaatacgattctcaagtttggtgtctgaaact
ataccgtgtcatcgagactaccagacgtatccttcgaaagagaaaactctatatagaaag
aaactgctaaaagtactagatgagcttgaatctttaaagccggaagcccagcgcctagtg
agcaaacttaacgaggcccaagcagttgctcaactacctcaacttgaaagcctagaaggc
acttcaaatggtttggcaacgtcttctttagagtggccttctgtgaacaataaatcgttg
agcctaagcgttaggcagcctggtagcttgacatctcagtcatcatggaagtatagaaat
gattattcacagatatcaacaaatactacacaaattgacaagcagttccagaagctatct
tttaatctacctcttcccaataaagagactttgtctagacactcatttttgggtccaaat
ggtcttcagggccagtggcgaggacctagtggaaaagttaaggttcagtatccaaccagt
actgacttaatccctacggataattcagacctgaatcaggctgtaccaaatgatattgtg
gctgtacaagatggtgatccaggaggaattaaatctacaatggaatcggtgctctccttg
gatgatggtgcatggccatgctcttctcaggaatcaagtccttcattgattaatggagca
agggaagatcccttcgagttggtcatccgtcagccttctcctcctcctgtacttgctcga
gtgcagcaggaatatgctccaattcctccatcaaaagtggcagatccaaggccaggactt
gcaaaaccttctctggatggaatgccaagctccaattcatatcaacatttacatgttcca
gtaaaattgatggatgatttcttgagattggctagggctaatacagaaaaaaacttagag
acgtgtggtattcttgctggtgcattgaaaaacaaggttttccatatcaccacgctaata
gtcccaaagcaagagtcgacctctgattcgtgccaaacgttgaatgaggaagaaatattt
gaggttcaagacagattatctctttttccacttggctggattcatacacacccatcacag
acctgtttcatgtcgtccgttgatctgcacactcactactcataccagattatgttacca
gaagcaattgcaatcgttatggctccaacagatacatccagtccacacggcatatttcat
ctatcggacccagatggtgtatctgtaattcgtaactgtgatcagcgtgggtttcatcca
catgaagagccctcggatggaaacccaatttatgagcattgttctcatgtgtttataaac
tccaatttgaggattaatgtggtcgatctgcggtga
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