Malus sylvestris (European crab apple): 126606632
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Entry
126606632 CDS
T09027
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00061
Fatty acid biosynthesis
msyl00071
Fatty acid degradation
msyl01100
Metabolic pathways
msyl01212
Fatty acid metabolism
msyl04146
Peroxisome
Module
msyl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
126606632
00071 Fatty acid degradation
126606632
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
126606632
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msyl01004
]
126606632
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126606632
Enzymes [BR:
msyl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
126606632
Lipid biosynthesis proteins [BR:
msyl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
126606632
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of breast milk
126606632
Exosomal proteins of breast cancer cells
126606632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
126606632
NCBI-ProteinID:
XP_050129970
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Position
16:15643443..15657211
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AA seq
720 aa
AA seq
DB search
MAHDANPLSSALICSLEAKTNVPTLLPMDPAAAQRRLKAINRHLATGVDSESPLRPNPTT
AGEFFSEHGYSVVLPEKLDTGKWNVYRSARSPMKLVSRFPDHPEIGTLHDNFVHSVETFR
DYKYLGTRIRVDGTVGDYKWMTYGEAGTARSGIGSGLIYNGIPKGSSIGLYFINRPEWLI
VDHACSAYSYISVPLYDTLGPDAVKYIVNHAVMQVIFCVPQTLNSLLSFLADIPTVRLIV
VVGGMDDQMPSLPSSAGVKVVTYSKLLSQGSSSLQPFCPPKPEDVATICYTSGTTGTPKG
AVLTHGNLIANVAGTTIAIKFYPSDIYISYLPLAHIYERVNQVMTAYFGVAVGFYQGDNL
KLMDDMAALRPTIFSSVPRLYNRIYAGITNAVKTSGVLRERLFNAAYNAKKQALLSGKNP
SPMWDRLVFNKIKAKLGGRVRFMTSGASPLSPDVMQFLKICFSGEVAEGYGMTETSCVIS
AMDGDDKVCGHVGSPNPACEIKLVDVPEMNYTSDDQPYPRGEICVRGPIIFQGYHKDEVQ
TREVVDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQ
CFVYGDSFNSSLVAIVAVDPDALKAWADSEGIKFEDVGKLCNDPRARAAVLADMDAAGRE
AQLRGFEFVKAVTLVLEPFTMENGLLTPTFKIKRPQAKEYYAKAISAMYSELVASESSPR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggctcacgacgccaatccactttcttctgctctgatctgctcattggaagctaagacg
aacgtcccaacgctccttccgatggatccagcggcagctcagcgtcgccttaaagcaatc
aaccgccacctcgccaccggcgtcgactccgagtcccctctccggcccaatcccaccacc
gccggcgagttcttttccgagcatgggtacagtgtggtgcttccagagaaattagacaca
ggaaagtggaatgtatacagatctgcacgctccccaatgaagcttgttagtagattcccc
gatcatcctgaaattggtacactgcatgataattttgtgcattcagttgaaactttccga
gattacaaatatttgggcacacgaattcgcgttgatggaacagttggagattacaagtgg
atgacatacggagaagcaggtactgctcggtcaggaataggttctggcctaatttataat
ggaataccaaagggatcttcaattggattgtattttattaacagacctgagtggctcatt
gttgatcatgcctgctctgcgtattcgtatatatcagttcctttgtatgacactctaggt
ccagatgctgtcaagtacattgtaaatcatgctgttatgcaagttatcttttgtgtgcct
caaacattgaatagtttattgagcttcttggcggatattccaaccgtacgcctgattgtg
gttgttggggggatggatgatcaaatgccatctcttccgtcatcggctggagtgaaggtt
gtaacatattcaaaattgctgtctcagggctctagtagtcttcagcctttttgcccacca
aaaccagaggatgttgcaacaatatgctacacaagtggtacaacaggcactccgaaggga
gctgtattgactcatggaaacttgattgcaaatgttgctgggaccacgattgctatcaaa
ttctacccgtccgacatctacatatcatatcttcctttggcacacatttatgagcgggtt
aaccaggtcatgacggcatactttggagttgctgttggattctaccaaggggataattta
aaattaatggacgatatggcagctctaagacctaccatcttcagcagtgttcctaggctg
tataacagaatatatgcgggtattacaaatgcggtcaagacatccggtgtactgagggag
agactatttaatgctgcttacaatgccaagaagcaggcactattaagtggaaaaaatcca
tcccccatgtgggatagattggtattcaataagataaaggctaagctaggaggacgagtt
cgttttatgacgtcaggtgcttcacccttgtcacctgatgtaatgcagtttttgaagata
tgctttagtggtgaagtggctgaagggtatggaatgactgagacttcttgtgttattagt
gctatggatggggatgacaaagtatgtgggcatgttggctctcctaatccagcttgtgaa
ataaagcttgttgatgttccagaaatgaactatacatctgatgatcaaccatatcctcgt
ggtgaaatctgtgtgaggggtcctattatattccaaggatatcacaaagatgaagtgcag
acgagggaagtggtcgacgaagatggatggcttcatactggagacattgggttgtggtta
cctggaggtcgtctgaaaattattgataggaagaagaacattttcaagttggcacaggga
gagtatatagctccagagaaaatcgagaatgtctatgccaagtgcaagtttattgcccag
tgctttgtttatggcgacagctttaattcttctttggtagcgattgtcgcagtcgacccg
gatgcattgaaagcatgggctgattctgaaggcattaagtttgaagatgtagggaaacta
tgcaatgacccaagagcaagagcagctgtattggccgatatggatgctgctggcagggaa
gctcagttgagaggtttcgaatttgtaaaagccgtgacactggtgcttgaaccgttcaca
atggagaatggattgctcactccgacatttaagatcaagagacctcaagcaaaggagtac
tatgcaaaagcaatatcggccatgtattcagagctcgtcgcttctgaatcctcccctcga
tag
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