Malus sylvestris (European crab apple): 126606685
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Entry
126606685 CDS
T09027
Name
(RefSeq) protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126606685
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
126606685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_12
TPR_8
TPR_16
TPR_14
TPR_17
TPR_6
TPR_11
TPR_7
TPR_9
TPR_10
ANAPC3
Fis1_TPR_C
RPN7
NatA_aux_su
T7SS_EccA1_N
KATNA1_MIT
DUF6584
Motif
Other DBs
NCBI-GeneID:
126606685
NCBI-ProteinID:
XP_050130016
LinkDB
All DBs
Position
2:6515385..6523945
Genome browser
AA seq
1090 aa
AA seq
DB search
MACVYIPVQNSEEEVMVVLDQLPKEATDIIDILKAEQASLDLWLIIAREYFKQGKLDQFR
QILEEGSGAEIDEYYSDVRYERIAILNALGAYYTYLGKIETKQREKEEHFILATQFYNKA
SRIDIHEPSTWVGKGQLLLAKGEVDQAFSAFKIVLDGDRDNVPALLGQACVEFNRGHYSD
SLELYKRALQVHPDCPAAVRLGIGLCRYKMGQFDKARQAFERVLQANPENVEALVALAIL
DLHANTAAGIRRGMEKMQRAFEIYPYCAMALNYLANHFFYTGQHFLVEQLTETALAVTNH
GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQLKMGDLRS
ALSNFEKVLEVYPDNSDTLKVLGHIYVQLGQTEKALEFMRKATKVDPNDSQAFLDLGELL
ISSDAGAALDCLKTAHNLLKKEGQEVPIEVLNNLGVLHFERGEFELAQQTFREALGDGIW
LAFIDGKENPPSIDANATISQYKDMGIFHHLEKEGHLVELPWDKVTALFNLARLLEQLHI
TETASILYRLILFKYPDYVDAYLRLAALAKARNNFQLSIELVNDALKVNNKCPNALLMLG
DLELKNDDWVKAKETLRAASEATEGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKS
KELYTKVLSQHSANLYAANGAGVVFAEKGHFDVSKDIFTQVQEAASGNIFVQMPDVWINL
AHVYFAQGNFALAVKMYQNCLRKFFNNTDSQILLYLARTHYEAEQWQDCKKSLLRAIHLA
PSNYTLRFDAGVVMQKFSASTLQKPKKSVDEVRSTVSELENAVRLFRQLSAASSLHIHGF
DEKKIDTHVEYCSHLLDAARVHFKAAEHEEQKIKHKQEVARQMALAEEARRKAEEQRKFQ
LERRMQEDELKRVRQQEEQFERVKEQWKSSTPGSKRRERSEMDDEEGGHSEKRRRKGGKR
RKKDKHSRSRYETEGAEAEMMDDQEEPEYEDANMNYREPMGQMNEQDEEENVQDHLAAAG
LEDSDADEEAALSTARRRRAFSESDDDEQPEHQPESSPVRENSAELQSDGEGREGGGDKL
DGDAALDDED
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcgtgtatataccggtgcagaattcggaggaggaggtgatggtggttctggat
cagctccctaaggaagctacagatatcatcgacatcctcaaggccgagcaagcatctctc
gatctctggctcattatcgcgagagagtatttcaaacaaggaaagcttgaccagttccgc
cagattttggaggaaggctccggtgctgaaattgatgaatattattctgatgttcgttat
gaaaggattgccatcttgaatgctttaggggcctactacacctaccttggaaaaattgag
acaaaacagagagaaaaggaggagcattttattttagcaacacaattctacaacaaagcg
tcgagaatcgacattcacgagccttctacttgggttgggaaaggtcagcttttactggct
aaaggtgaagtagatcaggcattttctgcattcaagattgtattagatggagaccgagat
aatgttcctgcccttttgggtcaggcatgcgttgaattcaatcgtgggcactattcagat
tcattggagctctacaagagggccctgcaagtacatcctgattgtcctgccgctgtaagg
cttggcataggtctctgtcgttacaaaatgggtcaatttgataaagctcggcaggccttt
gaacgggttctacaggcaaatccagaaaatgttgaggctcttgttgcacttgcaattctg
gatttgcatgcaaatacagctgctggaataagaagaggaatggaaaaaatgcaaagagct
tttgagatttacccttattgtgcaatggccttgaactatttggcaaaccattttttctac
actggtcagcactttctggttgagcaattaacggaaactgcactggctgtgaccaaccat
ggaccgacaaagtcacattcctactacaacttggcgcgatcttaccatagcaagggtgac
tatgataaggctggagtgtactacatggcatctgttaaggaaatcagtaaaccccatgag
ttcgtatttccttattatggtttgggacaagtacaactgaagatgggagatcttagaagt
gcactgtcgaactttgaaaaggttttggaggtttatcctgataatagtgacacattgaag
gtccttgggcacatatatgttcagcttgggcagactgagaaggccttggaatttatgagg
aaggccacaaaagtggacccaaatgattcccaggcatttcttgacctgggggaactgttg
atttcatctgatgctggagctgctctggattgcctaaaaactgcacataatcttttgaaa
aaggaaggtcaagaagtaccaattgaagttcttaacaatcttggggttctccattttgag
aggggagaatttgagcttgctcaacaaactttcagggaggcactaggtgatggaatatgg
ctggccttcatagatggtaaagaaaaccccccatctattgatgcgaatgcgactatttca
cagtacaaggacatgggtatatttcatcatcttgagaaagaaggtcacttagtcgaatta
ccttgggataaagtcacagcactatttaacctggccagattactcgagcagttacatatc
actgaaactgcaagcatactttaccgtctcattttgtttaagtatccagactatgtagat
gcttatctgagactcgctgccctggccaaagctcgaaataactttcaactaagcattgaa
ctggttaatgatgctctgaaggtgaataacaagtgcccaaatgcattattaatgcttggt
gacttggaattgaaaaatgatgactgggttaaggcaaaagaaaccttgcgggctgctagt
gaagcaactgaagggaaggattcctatgccaccctatctctgggcaactggaactacttc
gcggcaattcgcaatgagaagagaaatcccaagttggaagctacacatctggaaaaatcc
aaagaactctacactaaagtcctatctcaacattctgctaatttgtatgctgccaatggt
gccggagtggtctttgcagagaaaggtcactttgatgtttcaaaagacatttttacgcag
gttcaagaagctgccagtggaaacatttttgttcagatgccagacgtgtggataaatttg
gcacatgtttattttgctcaaggcaattttgcattggctgtgaaaatgtatcaaaactgc
ttgagaaagttctttaataacacggactctcagattctactctatttggctcgtacccat
tatgaagctgagcagtggcaagactgcaaaaagagtctactgagagccattcatttggca
ccttcaaattacacgctgaggtttgatgcaggcgttgtaatgcaaaagttctcagcttca
acgttacaaaagccaaagaaatctgttgatgaggtgcgatcaacagtttcagagctagaa
aatgctgttcgtttatttagacagttgtctgctgcttccagccttcacatccatggattt
gatgagaaaaaaatcgatacccatgttgagtattgtagtcacttgcttgatgctgcgaga
gttcacttcaaagcagctgagcatgaggagcagaagatcaagcacaaacaagaagttgct
cgtcaaatggcattggctgaggaggcccgtcgtaaggctgaagaacagaggaaattccag
ttggagaggagaatgcaagaggatgaactaaagcgagtgagacaacaggaggaacaattt
gaacgcgtaaaggagcaatggaagagcagtacacctggttccaagcgaagggaaaggtca
gaaatggatgatgaggagggtgggcatagtgaaaagagacggagaaagggtggaaagagg
agaaagaaggacaagcactcaagatcacgctatgaaacggagggagcagaagctgagatg
atggatgatcaggaagaaccggaatatgaagatgccaacatgaattacagggagcccatg
ggtcagatgaatgagcaggatgaagaagagaatgttcaagatcatcttgcagcagctggg
cttgaagattctgatgctgacgaggaggctgcactatccacggctcgacgaaggcgggca
ttttcagaatctgatgatgatgagcaaccagagcaccaacctgagtccagccctgtaaga
gaaaattctgccgagttacagagtgacggggaaggaagagaaggtggcggtgataaactg
gatggagacgccgctcttgacgatgaggattaa
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