Malus sylvestris (European crab apple): 126606910
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Entry
126606910 CDS
T09027
Name
(RefSeq) cullin-1-like isoform X1
KO
K03347
cullin 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04120
Ubiquitin mediated proteolysis
msyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126606910
04120 Ubiquitin mediated proteolysis
126606910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126606910
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
126606910
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF3232
Motif
Other DBs
NCBI-GeneID:
126606910
NCBI-ProteinID:
XP_050130261
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Position
16:13623602..13631808
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AA seq
742 aa
AA seq
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MNDRKTIDLEQGWEIMQKGITKLKNILEGLPEPQFISDDYMLLYTTIYNMCTQKPPHDYS
QQLYDKYRESFEEYITSTVLPSLREKHDEFMLRELVKRWTNHKIMVRWLSRFFHYLDRYF
ISRRSLPPLNEVGLTCFRDLVYQDLKAKVRDAVISLIDQEREGEQIDRALLKNVLDIFVE
IGMGQMDHYENDFEEDMLKGTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL
HSSSEPKLLEKVQHELLSVYATQLLEKEHSGCHALLRDDKVDDLSRMFRLFSKIPRGLDP
VSQIFKQHVTSEGTALVKQAEDAASNKKAEKKDVVGLQEQVFVRKVIELHDKYIAYVNEC
FQNHTLFHKALKEAFEIFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKV
VKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERCILTKLKQQCGGQFTSKMEGMVT
DLTLAKDNQVGFEEYLKNNPQANPGIDLTVTVLTTGFWPSYKSFDLNLPPEMVKCVELFR
EFYQTKTKHRKLTWMYSLGTCNIIGKFEPKTIELIVTTYQASALLLFNTSDRLSYSEIMT
QLNLTDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDYFEFNAKFTDKMRRIKIPLPPVD
EKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDFKAIKKRIE
DLITRDYLERDKDNPNLFRYLA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccgtaagaccatcgatttagaacaaggatgggagatcatgcagaaggggatc
acaaagctgaagaacattctagaagggttgcctgagccgcagttcatctctgatgactac
atgttgctctacacaaccatatacaatatgtgcactcaaaagccaccacatgactattca
cagcagctctatgacaagtacagggaatcttttgaagagtacattacttcgacggttttg
ccatctttgagagagaagcatgatgagttcatgttgagagagcttgtgaaaaggtggacc
aaccataaaattatggtcaggtggctctctcgtttctttcattatcttgatcgctacttt
atatctcggagatcacttccacccttaaatgaagttggacttacttgcttccgagatctc
gtctaccaagatttgaaagcaaaagtaagagatgctgtaatatctctgattgatcaagaa
cgtgaaggagagcagattgatcgagctctgttgaagaatgttctggatatatttgttgag
attggaatgggacaaatggatcactatgaaaatgactttgaagaagacatgcttaaaggc
accgctgcctattattctcgaaaagcttccaactggatcttagaagattcttgtccagat
tatatgctaaaagcagaggaatgtttaaaacgggagaaagatagagtttctcactacttg
cactctagtagtgagccaaagctgcttgagaaagttcaacatgagctgttgtctgtttat
gcaacacaattacttgagaaagagcactcgggatgccatgcattgcttcgagatgacaag
gtggatgatctgtctagaatgttcaggctattttctaagatacctcggggcttggatcct
gtttctcaaatattcaagcagcatgttacttctgaaggaacagccttagtcaaacaggca
gaagatgcagcaagcaacaagaaggcagagaaaaaggatgtggttggtttgcaggaacag
gtttttgttagaaaagtgattgagctgcatgataagtacatagcatacgtcaatgaatgt
ttccaaaaccatactcttttccacaaggccctaaaagaggcttttgagatcttttgcaac
aagggtgttgctggaagctctagtgcggaactacttgccactttttgtgataacattctt
aagaagggtgggagtgaaaagttgagcgatgaagccattgaggagacacttgagaaggtg
gtaaagttgctggcttatattagtgacaaggacctgttcgctgagttctataggaaaaag
cttgctcgacgtcttctttttgacaagagtgctaatgatgaccatgagcgatgtattttg
acaaaactgaagcaacaatgtggtggtcagtttacctcaaagatggagggaatggttact
gatttgacattggccaaggacaaccaagtcggctttgaggagtatctgaaaaataatcca
caggcaaatcctgggattgatttgacagttactgtgttgaccactggcttctggccaagc
tacaagtcttttgacctcaacctacccccagagatggttaagtgtgtagaacttttcagg
gaattctatcaaacaaagacaaaacacagaaaacttacgtggatgtactcactgggtacc
tgtaacatcattgggaaatttgaaccaaaaaccatagagcttattgtgacgacttatcag
gcttcagccctgctgctattcaatacctcagatagactgagttactcggagattatgact
cagttaaacttgactgatgatgatgttgtcagactactccattccttgtcatgtgccaag
tataagatccttaataaggaaccaaacacaaaaactatctctcctactgattactttgag
ttcaacgctaagtttactgacaaaatgaggaggatcaagattccactcccaccggtggac
gagaagaagaaagtaattgaagatgttgacaaggacagacggtatgccatcgatgcatca
attgtgcgtattatgaagagccgtaaagttttgggtcatcagcagttggttatggagtgt
gtagagcagctaggtcgcatgttcaagcccgacttcaaagcaataaaaaagaggatcgaa
gatctaatcacaagagactacttagagcgggacaaagacaaccctaatttgtttaggtac
ttggcttga
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