Malus sylvestris (European crab apple): 126606962
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Entry
126606962 CDS
T09027
Name
(RefSeq) probable pectate lyase 3
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126606962
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126606962
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126606962
NCBI-ProteinID:
XP_050130333
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Position
16:complement(5111939..5114183)
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AA seq
452 aa
AA seq
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MVAMFNSSYFFLFLFFLYFAVFVSSNDNPTDVPNEDTLVLDLDAYWKERAEEAEKVAMES
YNKNPEKVTEEFNTEVGKLMSKENTTRRNLRGNKAYTGPCMATNPMDACWRCDPNWANNR
KKIVGCAQGFGKKTTGGKDGPFYVVTMGTDDDVQNPKPGTLRHAVIQKGPLWIIFTKSMV
IRLQQELMVTSDKTIDARGANVVIEEGAGITLQFVKNVIITNLHIKMIVTKPGGLIRDSV
DHIGLRTQSDGDGISLFGASNVWIDHVSMSRCADGLIDAIMGSTAITISNSHFTDHDEAM
LFGANNAHTQDKIMQITLAFNHFGQGLVQRMPRVRHGFFHVVNNDYTHWIMYAIGGNMNP
TIISQGNRFIAPINGVTKQVTHRENTPEAEWKNWEWRSEGDLMMNGAFFVESGSGASKHP
AKLDMMPFKPGTLVSTLTKFSGALNCAVGKPC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggtagccatgtttaactcgtcctatttctttctatttttgtttttcttgtactttgct
gtattcgtttcgagcaacgataatccaaccgatgttccaaatgaagatacgctggtatta
gatttagatgcgtactggaaagaacgagccgaagaagctgaaaaggtggccatggaatcc
tacaataaaaatcctgagaaagtcactgaagagttcaatactgaagttggcaagcttatg
tcgaaggaaaacaccacaagaaggaacttgaggggtaacaaggcttatacgggtccatgc
atggcgaccaacccaatggacgcctgttggaggtgtgaccctaactgggccaacaaccga
aagaagattgtaggctgcgcccaaggcttcggtaaaaagaccaccggagggaaggatggt
cctttttacgtggtgacaatgggcacagatgatgacgtgcaaaaccctaaaccaggaacc
ctacgccatgccgtgattcagaaagggcctttgtggatcatcttcacaaaaagcatggtg
attaggctgcagcaagagctgatggtgactagtgacaagaccattgatgctaggggagcc
aatgttgtgatagaagagggtgctggcattaccctgcagtttgtgaagaatgtaatcatc
accaaccttcacataaaaatgattgtcaccaaacccggtggcctgatcagggactctgtc
gaccacataggtttaagaacccagagtgacggcgatggtatctccctctttggtgcctcc
aacgtctggatcgatcacgtttccatgtccaggtgcgcagatgggctcatcgacgccatc
atgggttccaccgccatcaccatctccaactcccacttcactgatcacgatgaggcgatg
ttgtttggtgccaacaacgcccacactcaagacaaaatcatgcagattactttggccttc
aaccactttggtcagggactggtgcagaggatgccaagggtccggcacggattcttccac
gtggtgaacaacgactacacccactggatcatgtatgccatcggaggaaacatgaaccct
accatcatcagccagggtaacaggttcattgctcccattaacggggtcaccaaacaggtg
acccatagggagaatacaccagaggcagagtggaagaactgggaatggagatctgaggga
gatttgatgatgaatggagctttctttgttgaatctggatcaggagccagcaaacaccca
gcaaagttggacatgatgcccttcaaaccagggacccttgtctcaacgctcacaaaattt
tccggtgctctaaactgcgctgtcggcaaaccctgctag
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