Malus sylvestris (European crab apple): 126607039
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Entry
126607039 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6-like isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126607039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126607039
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
126607039
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
HECT type E3
126607039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
126607039
NCBI-ProteinID:
XP_050130413
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All DBs
Position
16:complement(10770057..10802878)
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AA seq
1033 aa
AA seq
DB search
MFFSGDSSTRKRVDLGGRSTKERDRQKLLEQTRLERNRRLWIRQQNLAALKIQKCFRGRK
VAAAEHSKVREQFYGRYGRHCQNADRFSFGPDSEFLRQLLFFFDARSVGDFSILVETCRL
LHQFVKETGDIISLVAGMDYSSKHALVKHRVKQLAYICMKAVHQNRNQLKDQLFAAPEET
TTSTTLLLEALVLLIDPKLPWACETVGYLLQRKAFILYREIILTGKESIKTHNYIGRVSS
LERSLAVVISHIGQEPCTCPNIDPHWSFSSQILTVPFVWKLFPYLGEVFARRGLSQHYIN
QMSLCVKNHADVLPKDASVELPGYACLIGNILESSGVALSQTDCSFQMALDLAGVATFLL
EALPSMKSSNRESKEDSMGGDDMIEGDDAMEICLNNDLERQICDAIDLRFLLQLTNVLFG
GISLSSGLDHRPDDKEVSAVGAACAFLHVTLNTLPLERIMTILAYRTELVPVLWNFMKRC
HENQKWQSVSEQLAYLLPGDAPGWLLPLAVFCPVYKHMLTVVDNEEFYEQEKPLSLKDIR
YLVIILRQALWQLLWVNPTAPSNSSKPVTTSSSKKHPVELIQHRVSIVASELLSQLQDWN
NRREFTSPSDFHADGVNEFFITQAVIENTRANDIMKQAPFLVPFTSRVKIFTSQLAAARQ
RHESNSVFTRNRFRIRRDRILEDAYDQMSALSEDDLRGPIRVTFVNEFGVEEAGIDGGGI
FKDFMENITQAAFDVQYGLFKETSDHLLYPSPGSGMIHEQHLQFFHFLGILLAKAMFEGI
LVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISELELYFVIVNNEYG
EQTEEELLPGGKNLRVTNENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIPKDWIDMF
NEHELQLLISGSLDSLDVDDLRMHTNYVGGYHSEHYVIDMFWEVLKSFSLENQKKFLKFV
TGCSRGPLLGFKHLEPLFCIQRAGGNGAEGALDRLPTAATCMNLLKLPPYRSKEQLESKL
MYAISADAGFDLS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctcgggcgattcatcgactcggaagcgagttgatttgggagggcggagtacg
aaggaaagggacaggcagaagcttttggagcagacaaggttggagcgcaaccgccggttg
tggatacggcagcagaacttagccgcgttgaaaatccagaaatgctttagagggaggaag
gtggcagcggctgaacattctaaggtgcgtgagcagttctatggaagatatgggaggcat
tgccagaatgcggacagatttagttttggtcctgattcagagtttctccgccagttactt
ttcttctttgatgctcgaagcgttggtgatttttctatccttgtggagacgtgccggttg
cttcatcaatttgtcaaagagacaggggatattattagcctcgttgcaggcatggattat
tcgtccaagcatgctttggtgaaacacagagtgaagcaacttgcatatatctgtatgaag
gctgttcatcaaaacagaaatcagttgaaggatcaactttttgcagcccctgaggaaaca
accacgtcaacaactttactgttagaagcattagtgttattgatagatcccaagcttcca
tgggcttgtgagacagttggctatcttttgcaaagaaaggcttttatcctgtatagagag
attattttaacaggaaaggaaagtataaagactcataactacattggcagagtgtcatcg
ttggagcgtagtcttgctgttgtaatttctcacattggtcaggagccatgtacgtgccca
aacatcgatccacattggagtttttcatctcaaattcttacagttccatttgtatggaag
ctattcccctacttaggagaggtttttgctagacgagggctgagccagcattatattaat
cagatgtcactctgtgtgaaaaatcatgctgatgtacttccgaaagatgcatcagttgag
ttacccggttatgcctgccttattggaaatatattggaatcttccggggtcgctctgtct
cagactgattgctcatttcaaatggctttagaccttgctggcgtcgcaacattcttgttg
gaggcccttccttcaatgaaatcatctaatagagaaagcaaagaagattctatgggtggt
gatgatatgattgaaggagatgatgcaatggaaatttgtttgaataatgatttagaacga
cagatatgtgatgccatagatctgcgctttcttctgcaattaacaaatgttttgtttgga
gggatttcactttctagtggcttggaccacagaccggatgataaagaggtgtcagctgtt
ggtgcggcttgtgcttttctacatgtcactttaaacaccttacctctggagagaatcatg
actatactagcttatagaacagaacttgttccggtgctttggaattttatgaaacggtgc
catgaaaaccagaaatggcagtcagtatctgagcagttggcatatctgctgcccggagat
gcacctggctggctattacctttggctgtattctgtcctgtgtacaagcacatgcttaca
gtagttgataatgaggagttctatgagcaggagaagccactatcattgaaggatatcaga
tacctagttatcatactcagacaggccctatggcaacttctttgggtgaatcctacggct
cccagtaattcttcgaaacctgtcacaacctcctcttctaagaagcaccctgtggagtta
attcaacatagagttagcattgtagcttctgaactcctttcccagttgcaagattggaac
aatagacgagaattcacatcccccagtgactttcatgctgatggtgtcaatgagttcttt
attacacaggccgtaatagaaaatacccgagcaaatgacatcatgaagcaagctcccttc
ctggtaccattcacaagcagagttaaaatattcacttcacaattggcagcagctagacaa
agacatgagtctaattctgtatttaccagaaaccgattcagaatacggcgggatcgtatc
ttggaagatgcttacgaccaaatgagtgcgctgtctgaagatgatcttcggggaccgatt
cgtgtaacgtttgtaaatgaatttggggttgaggaggctggaattgatggcggcgggatt
ttcaaagactttatggagaacattactcaggcagcctttgatgttcagtatggattgttt
aaggaaacatccgatcatttactctaccctagtcctggttcaggaatgattcacgaacag
catctccaattctttcactttcttgggattcttcttgcaaaggccatgttcgaggggatt
cttgttgatataccatttgctacgttttttctgagcaaattaaaacaaaagtacaactat
ttaaatgatttgccttcattggacccagagttgtatcgtcaccttattttcttgaagcgt
tataaaggtgatatatcagaattagaattgtactttgtcattgtaaataatgaatatgga
gagcaaacagaagaggagctgcttcccgggggaaaaaacctacgtgtcactaatgagaat
gtcattacctttattcatcttgttgccaaccatcgtttgaactttcagatacgtcaacaa
agttcacatttcttaagggggtttcagcagcttataccgaaagattggatagatatgttt
aatgagcatgaacttcagcttctgatatcaggttcacttgacagcttggatgtcgatgac
ctacggatgcacacaaactatgtgggtggctatcatagtgagcattatgtcattgacatg
ttctgggaagttctgaaaagtttttcattggaaaatcagaagaaatttctgaaatttgtg
accgggtgctctcgaggacctctgcttggattcaaacacttggaaccattattttgcata
cagagagctggtggcaatggagctgaaggagctcttgaccgattaccgactgcagccact
tgtatgaatctcctaaagcttccaccatatagaagtaaggagcaactggaatcaaaattg
atgtatgctataagcgcagatgccgggtttgatttgagctga
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integrated database retrieval system
