Malus sylvestris (European crab apple): 126607092
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Entry
126607092 CDS
T09027
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msyl04812
]
126607092
Cytoskeleton proteins [BR:
msyl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
126607092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
eIF2A
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_VPS8
PROPPIN
PAN2_N
Motif
Other DBs
NCBI-GeneID:
126607092
NCBI-ProteinID:
XP_050130487
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Position
16:complement(45262..54568)
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AA seq
803 aa
AA seq
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MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNALLSLSGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQVQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRSLTFSPDGR
ALLCGLHESLKVFSWEPIRCHDAVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR
IEPYALGNASRLSGHSESKSLSGGNLSVLNENAAKSSLGRSSVSQNSDSLVKETKSLGRL
SVSQNSDLVKEPKIIASTGIVPGTPQRINMNSSQKTIVASSVAVPNASTLKRSSTKTHST
ANIPTFNKSDVVPVIVPRTSMRSELSAESRKEVSVAGRPLAFSLQSKATDFRKLSNSREE
VDKPAVSSVSEHPAFKAIELSSAADKNGFSTVLSSTQGIHAEKNTKDDIYFGPGKHETSS
MMEPTASYQHESYEAPGHKVSREAFSAEGQRGGRLRSIAVNWEKRDRYSNYEGPTSNGTL
GTASAPNIIPLNAFKQRGYPTSTEKETVSASDEDAIADLLEKHDQFVGSMQSRVTKLQLV
YRYWERNDVKGVLGAMEKMADHAVIADVVSIMTEKFDIVTLDICTCLLPLLTGLLESNMD
RHLGISLEMLLKLVRVFGSVIYSAISASSSVGVDIEAEKRLERCNVCFVELEKVKCCLPA
LTRRGGSIAKAAQELNLALQEVS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgactactaaacgcgcttacaagctacaggaatttgtagcacattctgcagctgtgaat
tgcctcaagattggcagaaaatcttctagagttcttgtcaccggcggagaagatcacaag
gtcaatctctgggccattgggaaacccaatgccttactgagtttgtctggacacaccagt
ggaattgattcagtaagctttgattcttcagaggtcttagtagctgcaggagctgcaagt
ggtacaattaagctttgggatttagaggaggcaaagattgttcgcacgcttaccggtcac
agatccaattgtatatctgtggactttcatccttttggagagttctttgcatctggctcc
ttagatacaaatctcaaaatatgggatatcaggaagaaggggtgtattcacacatacaaa
ggccatactcgaggggtcaatgctatcagatttaccccagatggccgctgggttgtttct
ggtggagaggacaacactgtgaagttgtgggacctgaccgctggaaagctgctgcatgac
ttcaagtgtcatgagggccaggttcagtgcatagactttcatccccacgagtttctgcta
gcaacaggttcagcggataggactgtcaaattttgggaccttgaaaccttcgagctaatt
ggctctgctggacctgagacaactggagtgcgttctttgacttttagccctgatgggaga
gccctactctgtggattgcatgaaagtttaaaggttttctcgtgggagccaataaggtgc
catgatgctgtggaggtgggatggtctcgattgtcagatcttaatgttcatgagggaaag
cttcttggatgctcttacaatcagagttgtgttggagtgtgggttgtagacatctcgcgc
attgaaccgtatgcacttggtaatgccagcagattgagtgggcattcagaatctaaatca
ttgtctggtgggaatctctctgtgctcaatgagaacgctgctaaatctagtttgggccgg
tcatctgtttctcaaaattcagattctttagtgaaggaaacaaaatctcttggaaggtta
tcagtttctcagaattcagatctcgttaaggagccaaaaattattgcatccacaggaatt
gttcctggtactcctcaaaggatcaatatgaattccagtcaaaaaactattgtggctagt
tcagtggcagttcctaatgcatcaaccctgaagaggagttctactaagacccattcaaca
gctaatattccaacttttaacaagtctgatgtcgtacctgtaattgtgccaagaactagt
atgaggtcagagctgtcagctgagtctagaaaagaggttagcgttgctggaagaccactg
gcattttctttgcagtcaaaggcaactgatttccggaagttgtccaatagcagagaagaa
gtggataagccagctgtctcttcagtgtctgaacaccctgcttttaaggctattgaatta
agcagtgctgcagataagaatggcttctcaacagttttaagttcaactcagggaatacat
gctgaaaagaacacaaaggatgatatatattttgggcctgggaagcatgaaactagttca
atgatggagccaactgcaagttaccagcatgaaagttatgaggctccagggcacaaggtg
agcagagaagcattttctgctgaaggtcaaagaggagggagattgcgctcaattgctgta
aattgggagaaaagagatagatattctaactacgagggacctacttccaatggtaccctg
ggaacagcttctgcaccaaatattatccctttaaatgcgtttaagcagcgaggttatcct
acatctactgaaaaagaaacagtgtctgctagtgatgaggatgctattgcagatctcctg
gaaaaacacgatcagtttgttggctccatgcaatctcgtgttaccaaattacagttagtc
tatagatattgggaaaggaatgatgttaagggggtccttggtgcaatggagaagatggct
gatcatgctgtcattgcggatgtagtcagcattatgacagaaaaatttgatattgtcaca
ctggatatatgcacttgccttctgccactcctcactggccttctagaaagtaacatggat
aggcatttaggcatttctttggaaatgctgctcaagctggttagagtgtttggttctgtg
atctattcagcaatatctgcctcgtcatctgttggcgttgatattgaagccgagaaaagg
ctggagcgttgcaacgtctgttttgtggagcttgaaaaggtcaaatgctgtttgccggct
ctaaccagaagaggaggatcaattgcaaaggctgcacaggagttgaatttagctcttcag
gaagtttcatga
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integrated database retrieval system
