Malus sylvestris (European crab apple): 126607178
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Entry
126607178 CDS
T09027
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
msyl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126607178
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126607178
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126607178
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126607178
03036 Chromosome and associated proteins [BR:
msyl03036
]
126607178
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
126607178
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
126607178
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
126607178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
PDS5
HEAT_EZ
Htt_N-HEAT_1
Adaptin_N
CLASP_N
Cnd1
TAF6_C
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
126607178
NCBI-ProteinID:
XP_050130629
LinkDB
All DBs
Position
16:2898896..2904340
Genome browser
AA seq
587 aa
AA seq
DB search
MSVVEEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMREG
DLVNWFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDTLKTELRSIYSQLCQDDMPMVR
RSAATNLGKFAATVEPAHLKADVMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEHTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMALVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LEMINNPHYLYRMTILRAICLLAPVMGSEITCSKLLPVVVNAAKDRVPNIKFNVAKVLQS
LISIVDQSVVEKTIRPSLVELSEDPDVDVRFFANQALQAIDHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggttgaggaaccgctatacccaatagccgttctcatagacgagcttaaaaat
gacgatatccagctgcggttgaactcaatccgcaggctatctacaattgcacgtgcgctt
ggggaagagcgaacccgtaaggagttaatcccatttctgagcgaaaacaatgacgatgac
gatgaggtgcttcttgcaatggcggaggagttgggggtcttcattccatatgttgggggt
gtggagcatgcacatgtgttgctcccgcccctggagaccctttgcactgttgaggaaacc
tgtgtgagggacaaggctgtggagtccttatgtaggattggatctcagatgagggagggt
gatttggttaactggtttattcctcttgtgaagaggttggctgctggtgaatggtttaca
gctcgagtctctgcatgtgggctttttcatattgcctaccctagtgcaccagatacattg
aagacagaactacgatcaatttacagtcagttgtgtcaagatgacatgcctatggttagg
aggtctgctgctacaaacctgggaaaatttgcagcaactgttgaacctgcgcatctgaaa
gctgatgtcatgtctatatttgaggatcttactcaagatgatcaagattctgttcgactc
ttggccgttgagggctgtgctgctttggggaagttgttggagccccaagattgtgttgca
catatcctccccgttatcgttaacttctctcaggataagtcttggcgagtgcgttacatg
gttgcaaatcaactatatgagctttgtgaagctgtggggcctgagcatacgaggacggac
ctggttccggcatatgtgcgattgcttcgagataatgaggctgaagtacgcatagcagct
gctggcaaagttaccaagttttgccggattttaagtccagaacttgcaattcagcatatt
cttccttgtgtgaaggagctgtcatcagattcttcccaacacgtccggtctgctttggct
tcagttataatgggcatggcccttgtattaggaaaggatgcaacaattgagcagctcctt
cccatttttctttcactcctgaaggacgaatttccagatgtgcgccttaatatcattagc
aagcttgatcaagtgaatcaggttattgggatcgatttgctatctcaatccttattacca
gccatagttgagcttgcggaggatagacattggagggttcgacttgcaataatagagtac
atacctttattggcaagtcagctgggtgtagggttctttgatgataagcttggtgccctt
tgcatgcagtggttgcaggacaaggtctactcaattcgtgatgctgctgctaacaattta
aagcgtctagcagaagagtttggtccagaatgggcaatgcaacatattgttccacaggtc
ctcgagatgataaacaatccacactatttgtatcgaatgacaattctgcgtgcaatctgt
ctccttgccccggttatgggttcagaaatcacatgttcaaaactgctgccagtggttgtc
aatgcggcaaaggacagagtaccgaacatcaaattcaatgttgcaaaggtgctgcagtcc
cttatctccatagttgatcagtctgtggtggagaaaacaattcgtccctctttggttgag
ctcagcgaggacccagatgttgacgtacgattcttcgctaaccaggcacttcaggcaatt
gatcatgtcatgatgtcaagctag
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